Table 1.
Summary results of expression profiles in RNAseq versus qPCR.
| miRNA name | RNA-seq expression pattern | P value in qPCR | Analysis result | ||||
|---|---|---|---|---|---|---|---|
| E. coli | B. pseudomallei | F. tularensis | E. coli | B. pseudomallei | F. tularensis | ||
| hsa-miR-125b-2-3p | ↓ | 0.625 | 0.734 | 0.162 | Not confirmed | ||
| hsa-miR-196b-3p | ↓ | 0.646 | 0.749 | 0.412 | Not confirmed | ||
| hsa-miR-10b-5p | ↑ | 0.770 | 0.272 | 0.525 | Not confirmed | ||
| hsa-miR-3177-3p | ↑ | 0.410 | 0.078 | 0.258 | Not confirmed | ||
| hsa-miR-200b-3p | ↑ | 0.989 | 0.064 | 0.282 | Not confirmed | ||
| hsa-miR-3074-3p | ↑ | 0.122 | 0.709 | 0.067 | Not confirmed | ||
| hsa-miR-135b-5p | ↑ | 0.145 | 0.058 | 0.308 | Not confirmed | ||
| hsa-miR-4662a-3p | ↑ | 0.891 | 0.454 | 0.516 | Not confirmed | ||
| hsa-miR-4688 | ↑ | 0.654 | 0.272 | 0.367 | Not confirmed | ||
| hsa-miR-4755-5p | ↑ | 0.086 | 0.412 | 0.574 | Not confirmed | ||
| hsa-miR-127-5p | ↓ | ↓ | 0.262 | 0.275 | 0.625 | Not confirmed | |
| hsa-miR-4651 | ↓ | ↓ | 0.741 | 0.184 | 0.139 | Not confirmed | |
| hsa-miR-548ai | ↓ | 0.310 | 0.385 | 0.408 | Not confirmed | ||
| hsa-miR-1226-3p | ↓ | 0.657 | 0.011 | 0.307 | Not confirmed in Ft but ↑ in Bp | ||
| hsa-miR-485-5p | ↓ | 0.017 | 0.713 | 0.599 | Not confirmed in Ft but ↓ in Ec | ||
| hsa-miR-4523 | ↓ | 0.533 | 0.159 | 0.466 | Not confirmed | ||
| hsa-miR-323b-3p | ↑ | 0.218 | 0.150 | 0.281 | Not confirmed | ||
| hsa-miR-3909 | ↑ | 0.243 | 0.152 | 0.362 | Not confirmed | ||
| hsa-miR-146a-5p | ↑ | 0.883 | 0.262 | 0.252 | Not confirmed | ||
| hsa-miR-5586-3p | ↑ | 0.989 | 0.650 | 0.709 | Not confirmed | ||
| hsa-miR-3667-3p | ↑ | 0.075 | 0.079 | 0.121 | Not confirmed | ||
| hsa-miR-154-5p | ↑ | 0.061 | 0.495 | 0.818 | Not confirmed | ||
| hsa-miR-125b-5p | ↑ | 0.483 | 0.242 | 0.102 | Not confirmed | ||
| hsa-miR-2964a-3p | ↑ | 1.000 | 0.554 | 0.379 | Not confirmed | ||
| hsa-miR-4802-3p | ↑ | 0.027 | 0.299 | 0.583 | Not confirmed in Ft but ↓ in Ec | ||
| hsa-let-7d-5p | ↑ | 0.719 | 0.018 | 0.164 | Not confirmed in Ft but ↑ in Bp | ||
| hsa-miR-579 | ↑ | 0.292 | 0.394 | 0.495 | Not confirmed | ||
| hsa-miR-30c-5p | ↑ | 0.179 | 0.024 | 0.046 | Confirmed in Ft and also ↑ in Bp | ||
| hsa-miR-874 | ↑ | 0.085 | 0.357 | 0.714 | Not confirmed | ||
| hsa-miR-3613-3p | ↑ | 0.893 | 0.155 | 0.423 | Not confirmed | ||
| hsa-miR-424-3p | ↑ | 0.751 | 0.289 | 0.303 | Not confirmed | ||
| hsa-let-7a-2-3p | ND | ND | ND | 0.642 | 0.057 | 0.311 | Not confirmed |
| hsa-miR-19a-5p | ND | ND | ND | 0.708 | 0.596 | 0.118 | Not confirmed |
| hsa-miR-92a-2-5p | ND | ND | ND | 0.973 | 0.509 | 0.362 | Not confirmed |
| hsa-miR-208a | ND | ND | ND | 0.973 | 0.509 | 0.341 | Not confirmed |
| hsa-miR-23b-5p | ND | ND | ND | 0.622 | 0.014 | 0.084 | Not confirmed but ↑ in Bp |
ND = not detected in RNAseq data.