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. 2017 Jun 12;6(7):1–12. doi: 10.1093/gigascience/gix043

Table 2:

Basic stats comparison of R9 and R9.4 reads after processing.

R9 R9.4
Total raw data 17 038 (100%) 39 216 (100%)
Reads >1.5 kb 12 278 (72%) 33 764 (86%)
Read length distribution 25th percentile = 2847 nt, median = 3303 nt; 75th percentile = 3754 25th percentile = 3730 nt, median = 3976 nt; 75th percentile = 4135 nt
Reads aligned (bc1 + bc8) 3227 (19%) 14 392 (43%)
Alignment identity distribution 25th percentile = 66.5%, median = 69%; 75th percentile = 73% 25th percentile = 81%, median = 85%; 75th percentile = 87%
Maximum identity 86.7% 92%