Table 1.
List of lncRNAs (Long Non-coding RNAs) that have been described being part of the MYC network. For each lncRNA, the table shows the official name, alternative names used in the literature, the gene identification number used in the Ensembl database and if the lncRNA is positively or negatively regulated by MYC or it exert a positive or negative effect on MYC expression.
| Name | Alternative Name | Ensembl Gene ID | Regulation |
|---|---|---|---|
| lncRNAs regulated by MYC | |||
| H19 | ENSG00000130600 | positive | |
| DANCR | ANCR | ENSG00000226950.2 | positive |
| SNHG16 | NcRAN | ENSG00000163597 | positive |
| MINCR | LINC01604 | ENSG00000253716.1 | positive |
| AK021907 | MYCLo-1 | None | positive |
| ELFN1-AS1 | MYCLo-2 | ENSG00000236081 | positive |
| KTN1-AS1 | MYCLo-3 | ENSG00000186615 | positive |
| AK098037 | MYCLo-4 | None | negative |
| LPP-AS2 | MYCLo-5,6 | ENSG00000270959 | negative |
| VPS9D1-AS1 | MYU | ENSG00000261373 | positive |
| ENST00000553181.5 | lncRNA-MIF | ENSG00000257135 | positive |
| BCYRN1 | BC200a | None | positive |
| lncRNAs affecting MYC Expression | |||
| PVT1 | LINC00079 | ENSG00000249859 | positive |
| CCAT1 | CARLo-5 | ENSG00000247844 | unknown |
| CCAT1-L | ENSG00000247844 | positive | |
| CCAT2 | LINC00873 | ENSG00000280997.1 | unknown |
| PCAT1 | ENSG00000253438 | positive | |
| MYCNUT | lncUSMycN | ENSG00000223850 | positive |
| MYCNOS | ENSG00000233718 | positive | |
| lncRNAs affecting MYC stability/translation | |||
| GHET1 | ENSG00000281189.1 | positive | |
| LINC-ROR | CTD-2526M8.1 | ENSG00000258609 | positive |
| ENST00000553181.5 | lncRNA-MIF | ENSG00000257135 | negative |
| GAS5 | SNHG2 | ENSG00000234741.7 | negative |
| lncRNAs affecting MYC transcriptional activity | |||
| PCGEM1 | PCAT9 | ENSG00000227418.6 | positive |
| MINCR | LINC01604 | ENSG00000253716.1 | positive |
| LPP-AS2 | MYCLo-6 | ENSG00000270959 | negative |