Table 1.
Expected diffraction ratios for potential applications of resolved anomalous phasing
Molecule | NP | NA |
|
|
||
---|---|---|---|---|---|---|
Sulphur-rich proteins: | ||||||
Crambin | 400 | 6S | 1.4% | 29% | ||
Snake neurotoxin38 | 500 | 8S | 1.5% | 30% | ||
Metalloproteins: | ||||||
Hi PIP39 | 700 | 4Fe/8S | 5.3% | 38% | ||
Haemerythrin19 | 1,000n | 2nFe | 3.0%* | 17%* | ||
Oligonucleotides: | ||||||
d(CPGPCPGPCPG)40 | 300 | 10P | 1.6% | 39% | ||
Oligopeptides: | ||||||
Antamanide41 | 100 | 10O | 0.5%† | 37% | ||
Heavy-atom complexes: | ||||||
Myoglobin42 | 1,300 | 1Hg | 4.5% | 31% | ||
Lysozyme43 | 1,100 | 1U | 8.5% | 39% |
NP is the approximate number of non-hydrogen atoms in the total molecule and NA is the number of anomalous scatterers. (Omission of hydrogen atoms has a negligible effect on these calculations: 〈FP〉 with hydrogens is ~1.01〈FP〉 without hydrogens.) The diffraction ratios are estimates for zero scattering angle. In the case of only one kind of anomalous scatterer these ratios are and where Zeff is the effective atomic number (~6.7 for non-hydrogen protein atoms) and is . FP and FA are structure-factor magnitudes of real contributions from the complete molecule and from anomalous scatterers only, respectively. Of course, the diffraction ratios will vary with scattering angle in the same way as the ratio of thermal and scattering factors for the anomalous scatterers to those of the other atoms. Except where noted all estimates are for CuKα radiation.
At low resolution (for example, 5.5 Å) these values are enhanced by a factor of 21/2 because the dimeric iron centre is then unresolved.
Oxygen anomalous scattering is computed for CrKα radiation.