Table 2.
Genomic feature and CAZyme family of strain PR1 and six related strains.
| PR1 | Cellvibrio japonicus | Cellvibrio sp. BR | Cellvibrio sp. OA-2007 | Cellvibrio sp. PSBB023 | Cellvibrio mixtus | |
|---|---|---|---|---|---|---|
| Genome size (Mb) | 4.43 | 4.58 | 4.85 | 4.59 | 4.7 | 5.18 |
| GC (mol%) | 47.56 | 52 | 48.8 | 47.7 | 49.4 | 46.66 |
| Total genes | 3,844 | 3679 | 4144 | 4094 | 4062 | 4916 |
| Predict proteins | 3,730 | 3577 | 4047 | 3872 | 3910 | 2845 |
| Annotation percentage (%) | 97.0 | 97.23 | 97.66 | 94.58 | 96.26 | 57.87 |
| CAZyme familya | ||||||
| CBMs | 63 | 95 | 105 | 118 | 49 | 121 |
| CEs | 20 | 24 | 33 | 24 | 21 | 27 |
| GHs | 128 | 132 | 159 | 132 | 97 | 135 |
| GTs | 38 | 49 | 54 | 49 | 54 | 58 |
| PLs | 2 | 14 | 0 | 5 | 0 | 0 |
| AAs | 0 | 0 | 3 | 6 | 3 | 9 |
| Total | 251 | 314 | 354 | 334 | 224 | 350 |
aCBMs: carbohydrate-binding modules; CEs: carbohydrate esterases; GHs: glycoside hydrolases; GTs: glycosyl transferases; PLs: polysaccharide lyases; AAs: auxiliary activities.