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. 2017 Jul 17;13(7):e1006916. doi: 10.1371/journal.pgen.1006916

Table 2. Ancestry distribution of samples included in GWAS.

Rows are as follows: (1) “Totals”: number of samples of a given ancestry in analyzed papers, with redundancy between studies published multiple times; (2) “Rate in GWAS”: percentage of total samples considered that were of this ancestry; (3) “Rate in Population”: percentage of world’s population that is of this ancestry; (4) “Enrichment in GWAS”: relative over (or under) representation of ancestry in GWAS relative to its rate in the world. Ancestry labels are approximations with the standard correspondences to HapMap2 reference samples (European = CEU, East Asian = JPT+CHB, African = YRI); here, “African American” denotes samples reported with that nomenclature, which typically corresponds to 80:20 admixture between ancestral sub-Saharan African and Western European genetics [11]. All of these equivalences are oversimplifications but correspond to assumptions widely used in the field. Counts are computed from totals across all papers analyzed in this study, not adjusting for duplicate uses of the same datasets across multiple studies. Total sample sizes are maximum counts of samples assuming no per-genotype missingness is present. The totals are rounded to the nearest integer as several imputed studies reported nonintegral sample sizes. Row 3 percentages in world population are approximations based on demographic data from 2014–2015 [12, 13].

European East Asian African African American
Totals 1601628 135472 1226 80006
Rate in GWAS (percent) 88.08 7.45 0.07 4.4
Rate in Population (percent) 13.3 59.8 13.1 0.5
Enrichment in GWAS (percent) 670.8 12.5 0.51 821.6