Table 2. Associations between infrequently expressed miRNAs in colorectal cancer and TP53 mutations.
miRNA |
Not-mutated |
TP53-Mutated |
P-value |
|||||
---|---|---|---|---|---|---|---|---|
N | % | N | % | OR | (95% CI) | unadjusted | Q value | |
hsa-miR-1207-3p | ||||||||
Down-regulateda | 68 | 7.1 | 80 | 9.3 | 1.31 | (0.94, 1.84) | 0.115 | 0.919 |
Referent | 849 | 89.1 | 773 | 89.5 | 1.00 | |||
Up-regulated | 36 | 3.8 | 11 | 1.3 | 0.35 | (0.17, 0.69) | 0.002 | 0.030 |
hsa-miR-1243 | ||||||||
Down-regulated | 161 | 16.9 | 140 | 16.2 | 0.92 | (0.72, 1.18) | 0.519 | 0.981 |
Referent | 710 | 74.5 | 677 | 78.4 | 1.00 | |||
Up-Regulated | 82 | 8.6 | 47 | 5.4 | 0.60 | (0.41, 0.88) | 0.008 | 0.042 |
hsa-miR-1296 | ||||||||
Down-regulated | 51 | 5.4 | 44 | 5.1 | 0.95 | (0.63, 1.45) | 0.824 | 0.981 |
Referent | 878 | 92.1 | 777 | 89.9 | 1.00 | |||
Up-Regulated | 24 | 2.5 | 43 | 5.0 | 2.02 | (1.22, 3.37) | 0.007 | 0.039 |
hsa-miR-133a | ||||||||
Down-regulated | 35 | 3.7 | 38 | 4.4 | 1.19 | (0.74, 1.91) | 0.469 | 0.981 |
Referent | 910 | 95.5 | 805 | 93.2 | 1.00 | |||
Up-Regulated | 8 | 0.8 | 21 | 2.4 | 2.99 | (1.32, 6.80) | 0.009 | 0.043 |
hsa-miR-133b | ||||||||
Down-regulated | 483 | 50.7 | 458 | 53.0 | 1.17 | (0.96, 1.43) | 0.116 | 0.919 |
Referent | 415 | 43.5 | 326 | 37.7 | 1.00 | |||
Up-Regulated | 55 | 5.8 | 80 | 9.3 | 1.85 | (1.27, 2.69) | 0.001 | 0.030 |
hsa-miR-151a-3p | ||||||||
Down-regulated | 43 | 4.5 | 34 | 3.9 | 1.03 | (0.64, 1.65) | 0.900 | 0.982 |
Referent | 583 | 61.2 | 430 | 49.8 | 1.00 | |||
Up-Regulated | 327 | 34.3 | 400 | 46.3 | 1.63 | (1.35, 1.98) | <0.0001 | 0.030 |
hsa-miR-184 | ||||||||
Down-regulated | 197 | 20.7 | 204 | 23.6 | 1.29 | (1.02, 1.62) | 0.031 | 0.919 |
Referent | 623 | 65.4 | 511 | 59.1 | 1.00 | |||
Up-Regulated | 133 | 14.0 | 149 | 17.2 | 1.40 | (1.08, 1.82) | 0.012 | 0.047 |
hsa-miR-192-3p | ||||||||
Down-regulated | 222 | 23.3 | 189 | 21.9 | 0.97 | (0.77, 1.22) | 0.793 | 0.981 |
Referent | 650 | 68.2 | 555 | 64.2 | 1.00 | |||
Up-Regulated | 81 | 8.5 | 120 | 13.9 | 1.73 | (1.27, 2.34) | 0.000 | 0.030 |
hsa-miR-19a-3p | ||||||||
Down-regulated | 11 | 1.2 | 8 | 0.9 | 0.91 | (0.36, 2.27) | 0.836 | 0.981 |
Referent | 745 | 78.2 | 597 | 69.1 | 1.00 | |||
Up-Regulated | 197 | 20.7 | 259 | 30.0 | 1.64 | (1.33, 2.04) | <0.0001 | 0.030 |
hsa-miR-224-5p | ||||||||
Down-regulated | 24 | 2.5 | 14 | 1.6 | 0.93 | (0.47, 1.84) | 0.843 | 0.981 |
Referent | 364 | 38.2 | 222 | 25.7 | 1.00 | |||
Up-Regulated | 565 | 59.3 | 628 | 72.7 | 1.79 | (1.46, 2.19) | <0.0001 | 0.030 |
hsa-miR-3190-5p | ||||||||
Down-regulated | 11 | 1.2 | 11 | 1.3 | 1.14 | (0.49, 2.65) | 0.758 | 0.981 |
Referent | 937 | 98.3 | 837 | 96.9 | 1.00 | |||
Up-Regulated | 5 | 0.5 | 16 | 1.9 | 3.62 | (1.32, 9.93) | 0.013 | 0.047 |
hsa-miR-31-5p | ||||||||
Down-regulated | 14 | 1.5 | 11 | 1.3 | 0.83 | (0.37, 1.83) | 0.637 | 0.981 |
Referent | 775 | 81.3 | 762 | 88.2 | 1.00 | |||
Up-Regulated | 164 | 17.2 | 91 | 10.5 | 0.57 | (0.43, 0.75) | <.0001 | 0.030 |
hsa-miR-3607-3p | ||||||||
Down-regulated | 53 | 5.6 | 63 | 7.3 | 1.36 | (0.93, 1.99) | 0.111 | 0.919 |
Referent | 835 | 87.6 | 715 | 82.8 | 1.00 | |||
Up-Regulated | 65 | 6.8 | 86 | 10.0 | 1.52 | (1.09, 2.14) | 0.014 | 0.0495 |
hsa-miR-3609 | ||||||||
Down-regulated | 193 | 20.3 | 142 | 16.4 | 0.86 | (0.67, 1.11) | 0.247 | 0.981 |
Referent | 588 | 61.7 | 492 | 56.9 | 1.00 | |||
Up-Regulated | 172 | 18.0 | 230 | 26.6 | 1.60 | (1.27, 2.02) | <0.0001 | 0.030 |
hsa-miR-3615 | ||||||||
Down-regulated | 207 | 21.7 | 201 | 23.3 | 1.04 | (0.83, 1.31) | 0.708 | 0.981 |
Referent | 640 | 67.2 | 602 | 69.7 | 1.00 | |||
Up-Regulated | 106 | 11.1 | 61 | 7.1 | 0.63 | (0.45, 0.88) | 0.007 | 0.039 |
hsa-miR-3622b-3p | ||||||||
Down-regulated | 22 | 2.3 | 26 | 3.0 | 1.48 | (0.83, 2.64) | 0.186 | 0.966 |
Referent | 746 | 78.3 | 615 | 71.2 | 1.00 | |||
Up-Regulated | 185 | 19.4 | 223 | 25.8 | 1.48 | (1.19, 1.85) | 0.001 | 0.030 |
hsa-miR-362-5p | ||||||||
Down-regulated | 26 | 2.7 | 13 | 1.5 | 0.60 | (0.31, 1.18) | 0.141 | 0.919 |
Referent | 730 | 76.6 | 587 | 67.9 | 1.00 | |||
Up-Regulated | 197 | 20.7 | 264 | 30.6 | 1.66 | (1.34, 2.06) | <0.0001 | 0.030 |
hsa-miR-3687 | ||||||||
Down-regulated | 12 | 1.3 | 14 | 1.6 | 1.42 | (0.65, 3.11) | 0.376 | 0.981 |
Referent | 726 | 76.2 | 580 | 67.1 | 1.00 | |||
Up-Regulated | 215 | 22.6 | 270 | 31.3 | 1.57 | (1.27, 1.93) | <0.0001 | 0.030 |
hsa-miR-374a-5p | ||||||||
Down-regulated | 15 | 1.6 | 7 | 0.8 | 0.55 | (0.22, 1.35) | 0.189 | 0.966 |
Referent | 781 | 82.0 | 664 | 76.9 | 1.00 | |||
Up-Regulated | 157 | 16.5 | 193 | 22.3 | 1.43 | (1.13, 1.81) | 0.003 | 0.031 |
hsa-miR-374b-5p | ||||||||
Down-regulated | 31 | 3.3 | 16 | 1.9 | 0.62 | (0.34, 1.15) | 0.131 | 0.919 |
Referent | 711 | 74.6 | 563 | 65.2 | 1.00 | |||
Up-Regulated | 211 | 22.1 | 285 | 33.0 | 1.68 | (1.36, 2.08) | <0.0001 | 0.030 |
hsa-miR-424-5p | ||||||||
Down-regulated | 17 | 1.8 | 14 | 1.6 | 0.98 | (0.48, 2.00) | 0.950 | 0.997 |
Referent | 701 | 73.6 | 572 | 66.2 | 1.00 | |||
Up-Regulated | 235 | 24.7 | 278 | 32.2 | 1.41 | (1.15, 1.74) | 0.001 | 0.030 |
hsa-miR-4251 | ||||||||
Down-regulated | 72 | 7.6 | 76 | 8.8 | 1.35 | (0.95, 1.90) | 0.090 | 0.919 |
Referent | 639 | 67.1 | 514 | 59.5 | 1.00 | |||
Up-Regulated | 242 | 25.4 | 274 | 31.7 | 1.42 | (1.15, 1.75) | 0.001 | 0.030 |
hsa-miR-4296 | ||||||||
Down-regulated | 79 | 8.3 | 68 | 7.9 | 1.01 | (0.71, 1.42) | 0.975 | 0.997 |
Referent | 728 | 76.4 | 625 | 72.3 | 1.00 | |||
Up-Regulated | 146 | 15.3 | 171 | 19.8 | 1.38 | (1.08, 1.76) | 0.011 | 0.047 |
hsa-miR-4421 | ||||||||
Down-regulated | 216 | 22.7 | 179 | 20.7 | 0.95 | (0.75, 1.19) | 0.640 | 0.981 |
Referent | 664 | 69.7 | 589 | 68.2 | 1.00 | |||
Up-Regulated | 73 | 7.7 | 96 | 11.1 | 1.51 | (1.09, 2.09) | 0.013 | 0.047 |
hsa-miR-4654 | ||||||||
Down-regulated | 169 | 17.7 | 163 | 18.9 | 1.21 | (0.95, 1.56) | 0.128 | 0.919 |
Referent | 569 | 59.7 | 450 | 52.1 | 1.00 | |||
Up-Regulated | 215 | 22.6 | 251 | 29.1 | 1.48 | (1.19, 1.85) | 0.001 | 0.030 |
hsa-miR-4695-3p | ||||||||
Down-regulated | 25 | 2.6 | 25 | 2.9 | 1.14 | (0.65, 2.01) | 0.644 | 0.981 |
Referent | 912 | 95.7 | 808 | 93.5 | 1.00 | |||
Up-Regulated | 16 | 1.7 | 31 | 3.6 | 2.20 | (1.19, 4.06) | 0.012 | 0.047 |
hsa-miR-4711-5p | ||||||||
Down-regulated | 22 | 2.3 | 19 | 2.2 | 0.94 | (0.50, 1.75) | 0.849 | 0.981 |
Referent | 905 | 95.0 | 840 | 97.2 | 1.00 | |||
Up-Regulated | 26 | 2.7 | 5 | 0.6 | 0.22 | (0.08, 0.57) | 0.002 | 0.030 |
hsa-miR-484 | ||||||||
Down-regulated | 106 | 11.1 | 86 | 10.0 | 0.91 | (0.67, 1.24) | 0.550 | 0.981 |
Referent | 763 | 80.1 | 659 | 76.3 | 1.00 | |||
Up-Regulated | 84 | 8.8 | 119 | 13.8 | 1.59 | (1.18, 2.15) | 0.002 | 0.030 |
hsa-miR-5095 | ||||||||
Down-regulated | 134 | 14.1 | 105 | 12.2 | 0.89 | (0.67, 1.17) | 0.401 | 0.981 |
Referent | 710 | 74.5 | 624 | 72.2 | 1.00 | |||
Up-Regulated | 109 | 11.4 | 135 | 15.6 | 1.42 | (1.08, 1.87) | 0.013 | 0.047 |
hsa-miR-532-3p | ||||||||
Down-regulated | 61 | 6.4 | 44 | 5.1 | 0.83 | (0.55, 1.25) | 0.368 | 0.981 |
Referent | 739 | 77.5 | 622 | 72.0 | 1.00 | |||
Up-Regulated | 153 | 16.1 | 198 | 22.9 | 1.51 | (1.19, 1.91) | 0.001 | 0.030 |
hsa-miR-532-5p | ||||||||
Down-regulated | 48 | 5.0 | 22 | 2.5 | 0.60 | (0.35, 1.00) | 0.052 | 0.919 |
Referent | 655 | 68.7 | 482 | 55.8 | 1.00 | |||
Up-Regulated | 250 | 26.2 | 360 | 41.7 | 1.94 | (1.59, 2.37) | <.0001 | 0.030 |
hsa-miR-5685 | ||||||||
Down-regulated | 184 | 19.3 | 173 | 20.0 | 1.01 | (0.80, 1.28) | 0.922 | 0.993 |
Referent | 683 | 71.7 | 645 | 74.7 | 1.00 | |||
Up-Regulated | 86 | 9.0 | 46 | 5.3 | 0.57 | (0.39, 0.83) | 0.003 | 0.031 |
hsa-miR-625-5p | ||||||||
Down-regulated | 17 | 1.8 | 17 | 2.0 | 1.09 | (0.55, 2.15) | 0.806 | 0.981 |
Referent | 898 | 94.2 | 831 | 96.2 | 1.00 | |||
Up-Regulated | 38 | 4.0 | 16 | 1.9 | 0.47 | (0.26, 0.84) | 0.012 | 0.047 |
hsa-miR-652-3p | ||||||||
Down-regulated | 39 | 4.1 | 25 | 2.9 | 0.72 | (0.43, 1.20) | 0.209 | 0.966 |
Referent | 824 | 86.5 | 702 | 81.3 | 1.00 | |||
Up-Regulated | 90 | 9.4 | 137 | 15.9 | 1.75 | (1.32, 2.33) | 0.000 | 0.030 |
hsa-miR-664a-3p | ||||||||
Down-regulated | 201 | 21.1 | 186 | 21.5 | 1.13 | (0.89, 1.43) | 0.314 | 0.981 |
Referent | 569 | 59.7 | 455 | 52.7 | 1.00 | |||
Up-Regulated | 183 | 19.2 | 223 | 25.8 | 1.50 | (1.19, 1.89) | 0.001 | 0.030 |
hsa-miR-7-5p | ||||||||
Down-regulated | 14 | 1.5 | 10 | 1.2 | 0.98 | (0.43, 2.22) | 0.957 | 0.997 |
Referent | 580 | 60.9 | 421 | 48.7 | 1.00 | |||
Up-Regulated | 359 | 37.7 | 433 | 50.1 | 1.67 | (1.38, 2.01) | <0.0001 | 0.030 |
hsa-miR-98-5p | ||||||||
Down-regulated | 26 | 2.7 | 18 | 2.1 | 0.82 | (0.44, 1.51) | 0.522 | 0.981 |
Referent | 727 | 76.3 | 592 | 68.5 | 1.00 | |||
Up-Regulated | 200 | 21.0 | 254 | 29.4 | 1.54 | (1.24, 1.91) | <0.0001 | 0.030 |
Down-regulated have differential expression <−1.77; referent has differential expression between -1.77, 2.08; up-regulated has differential expression >2.08.