Table 4. Overall associations between differential miRNA expression in infrequently expressed miRNA and MSI tumors.
miRNA |
MSS |
MSI |
P-value |
|||||
---|---|---|---|---|---|---|---|---|
N | % | N | % | OR | (95% CI) | unadjusted | Q value | |
hsa-miR-1207-3p | ||||||||
Down-regulated | 140 | 8.3 | 13 | 7.6 | 0.96 | (0.53, 1.75) | 0.90 | 0.90 |
Referent | 1512 | 89.6 | 145 | 85.3 | 1.00 | |||
Up-Regulated | 35 | 2.1 | 12 | 7.1 | 3.28 | (1.65, 6.53) | 0.0007 | 0.04 |
hsa-miR-133b | ||||||||
Down-regulated | 891 | 52.8 | 68 | 40.0 | 0.57 | (0.40, 0.79) | 0.001 | 0.19 |
Referent | 664 | 39.4 | 96 | 56.5 | 1.00 | |||
Up-Regulated | 132 | 7.8 | 6 | 3.5 | 0.31 | (0.13, 0.74) | 0.08 | 0.04 |
hsa-miR-151a-3p | ||||||||
Down-regulated | 70 | 4.1 | 8 | 4.7 | 0.85 | (0.39, 1.82) | 0.67 | 0.71 |
Referent | 896 | 53.1 | 138 | 81.2 | 1.00 | |||
Up-Regulated | 721 | 42.7 | 24 | 14.1 | 0.22 | (0.14, 0.35) | <0.0001 | 0.04 |
hsa-miR-192-3p | ||||||||
Down-regulated | 384 | 22.8 | 35 | 20.6 | 0.86 | (0.57, 1.29) | 0.47 | 0.67 |
Referent | 1107 | 65.6 | 128 | 75.3 | 1.00 | |||
Up-Regulated | 196 | 11.6 | 7 | 4.1 | 0.31 | (0.14, 0.68) | 0.004 | 0.04 |
hsa-miR-199b-5p | ||||||||
Down-regulated | 107 | 6.3 | 18 | 10.6 | 1.55 | (0.89, 2.71) | 0.12 | 0.41 |
Referent | 1036 | 61.4 | 137 | 80.6 | 1.00 | |||
Up-Regulated | 544 | 32.2 | 15 | 8.8 | 0.22 | (0.13, 0.38) | <0.0001 | 0.04 |
hsa-miR-203a | ||||||||
Down-regulated | 174 | 10.3 | 17 | 10.0 | 0.70 | (0.40, 1.23) | 0.21 | 0.52 |
Referent | 474 | 28.1 | 71 | 41.8 | 1.00 | |||
Up-Regulated | 1039 | 61.6 | 82 | 48.2 | 0.52 | (0.37, 0.73) | 0.0002 | 0.04 |
hsa-miR-28-3p | ||||||||
Down-regulated | 186 | 11.0 | 16 | 9.4 | 0.95 | (0.55, 1.64) | 0.85 | 0.85 |
Referent | 1380 | 81.8 | 131 | 77.1 | 1.00 | |||
Up-Regulated | 121 | 7.2 | 23 | 13.5 | 1.88 | (1.16, 3.06) | 0.01 | 0.04 |
hsa-miR-30a-5p | ||||||||
Down-regulated | 604 | 35.8 | 64 | 37.6 | 1.00 | (0.71, 1.41) | 1.00 | 1.00 |
Referent | 900 | 53.3 | 101 | 59.4 | 1.00 | |||
Up-Regulated | 183 | 10.8 | 5 | 2.9 | 0.24 | (0.10, 0.61) | 0.003 | 0.04 |
hsa-miR-30e-5p | ||||||||
Down-regulated | 578 | 34.3 | 70 | 41.2 | 1.22 | (0.87, 1.71) | 0.24 | 0.53 |
Referent | 835 | 49.5 | 88 | 51.8 | 1.00 | |||
Up-Regulated | 274 | 16.2 | 12 | 7.1 | 0.43 | (0.23, 0.80) | 0.007 | 0.04 |
hsa-miR-3609 | ||||||||
Down-regulated | 289 | 17.1 | 52 | 30.6 | 1.79 | (1.25, 2.58) | 0.002 | 0.19 |
Referent | 1000 | 59.3 | 108 | 63.5 | 1.00 | |||
Up-Regulated | 398 | 23.6 | 10 | 5.9 | 0.23 | (0.12, 0.45) | <0.0001 | 0.04 |
hsa-miR-3615 | ||||||||
Down-regulated | 378 | 22.4 | 41 | 24.1 | 1.24 | (0.84, 1.83) | 0.27 | 0.54 |
Referent | 1173 | 69.5 | 99 | 58.2 | 1.00 | |||
Up-Regulated | 136 | 8.1 | 30 | 17.6 | 2.41 | (1.53, 3.79) | 0.0001 | 0.04 |
hsa-miR-374b-5p | ||||||||
Down-regulated | 44 | 2.6 | 5 | 2.9 | 0.97 | (0.37, 2.52) | 0.95 | 0.95 |
Referent | 1146 | 67.9 | 160 | 94.1 | 1.00 | |||
Up-Regulated | 497 | 29.5 | 5 | 2.9 | 0.08 | (0.03, 0.19) | <0.0001 | 0.04 |
hsa-miR-3922-5p | ||||||||
Down-regulated | 192 | 11.4 | 8 | 4.7 | 0.45 | (0.22, 0.94) | 0.03 | 0.28 |
Referent | 1318 | 78.1 | 127 | 74.7 | 1.00 | |||
Up-Regulated | 177 | 10.5 | 35 | 20.6 | 2.07 | (1.37, 3.13) | 0.0005 | 0.04 |
hsa-miR-4492 | ||||||||
Down-regulated | 93 | 5.5 | 11 | 6.5 | 1.18 | (0.61, 2.26) | 0.63 | 0.71 |
Referent | 1526 | 90.5 | 143 | 84.1 | 1.00 | |||
Up-Regulated | 68 | 4.0 | 16 | 9.4 | 2.29 | (1.28, 4.10) | 0.005 | 0.04 |
hsa-miR-4533 | ||||||||
Down-regulated | 231 | 13.7 | 27 | 15.9 | 1.27 | (0.81, 1.98) | 0.30 | 0.56 |
Referent | 1311 | 77.7 | 115 | 67.6 | 1.00 | |||
Up-Regulated | 145 | 8.6 | 28 | 16.5 | 2.09 | (1.32, 3.30) | 0.002 | 0.04 |
hsa-miR-484 | ||||||||
Down-regulated | 182 | 10.8 | 11 | 6.5 | 0.57 | (0.30, 1.08) | 0.09 | 0.38 |
Referent | 1307 | 77.5 | 151 | 88.8 | 1.00 | |||
Up-Regulated | 198 | 11.7 | 8 | 4.7 | 0.37 | (0.18, 0.78) | 0.008 | 0.04 |
hsa-miR-513a-3p | ||||||||
Down-regulated | 81 | 4.8 | 7 | 4.1 | 0.84 | (0.38, 1.86) | 0.67 | 0.71 |
Referent | 1575 | 93.4 | 154 | 90.6 | 1.00 | |||
Up-Regulated | 31 | 1.8 | 9 | 5.3 | 2.87 | (1.32, 6.24) | 0.01 | 0.04 |
hsa-miR-520d-3p | ||||||||
Down-regulated | 124 | 7.4 | 16 | 9.4 | 1.33 | (0.76, 2.32) | 0.32 | 0.58 |
Referent | 1495 | 88.6 | 140 | 82.4 | 1.00 | |||
Up-Regulated | 68 | 4.0 | 14 | 8.2 | 2.23 | (1.21, 4.11) | 0.008 | 0.04 |
hsa-miR-532-5p | ||||||||
Down-regulated | 59 | 3.5 | 10 | 5.9 | 1.31 | (0.64, 2.65) | 0.46 | 0.67 |
Referent | 1016 | 60.2 | 153 | 90.0 | 1.00 | |||
Up-Regulated | 612 | 36.3 | 7 | 4.1 | 0.08 | (0.04, 0.17) | <0.0001 | 0.04 |
hsa-miR-5685 | ||||||||
Down-regulated | 337 | 20.0 | 27 | 15.9 | 0.83 | (0.53, 1.29) | 0.41 | 0.66 |
Referent | 1243 | 73.7 | 116 | 68.2 | 1.00 | |||
Up-Regulated | 107 | 6.3 | 27 | 15.9 | 2.75 | (1.71, 4.40) | <0.0001 | 0.04 |
hsa-miR-664a-3p | ||||||||
Down-regulated | 360 | 21.3 | 28 | 16.5 | 0.59 | (0.38, 0.91) | 0.02 | 0.26 |
Referent | 923 | 54.7 | 130 | 76.5 | 1.00 | |||
Up-Regulated | 404 | 23.9 | 12 | 7.1 | 0.22 | (0.12, 0.40) | <0.0001 | 0.04 |
hsa-miR-98-5p | ||||||||
Down-regulated | 40 | 2.4 | 6 | 3.5 | 1.34 | (0.55, 3.26) | 0.52 | 0.67 |
Referent | 1189 | 70.5 | 158 | 92.9 | 1.00 | |||
Up-Regulated | 458 | 27.1 | 6 | 3.5 | 0.10 | (0.04, 0.23) | <0.0001 | 0.04 |
miRNA |
Microsatellite Stable |
Microsatellite Unstable |
P-value |
|||||
---|---|---|---|---|---|---|---|---|
N | % | N | % | OR | (95% CI) | unadjusted | Q value | |
hsa-miR-1207-3p | ||||||||
Down-regulateda | 140 | 8.3 | 13 | 7.6 | 0.96 | (0.53, 1.75) | 0.90 | 0.90 |
Referent | 1512 | 89.6 | 145 | 85.3 | 1.00 | |||
Up-Regulated | 35 | 2.1 | 12 | 7.1 | 3.28 | (1.65, 6.53) | 0.0007 | 0.04 |
hsa-miR-133b | ||||||||
Down-regulated | 891 | 52.8 | 68 | 40.0 | 0.57 | (0.40, 0.79) | 0.001 | 0.19 |
Referent | 664 | 39.4 | 96 | 56.5 | 1.00 | |||
Up-Regulated | 132 | 7.8 | 6 | 3.5 | 0.31 | (0.13, 0.74) | 0.08 | 0.04 |
hsa-miR-151a-3p | ||||||||
Down-regulated | 70 | 4.1 | 8 | 4.7 | 0.85 | (0.39, 1.82) | 0.67 | 0.71 |
Referent | 896 | 53.1 | 138 | 81.2 | 1.00 | |||
Up-Regulated | 721 | 42.7 | 24 | 14.1 | 0.22 | (0.14, 0.35) | <0.0001 | 0.04 |
hsa-miR-192-3p | ||||||||
Down-regulated | 384 | 22.8 | 35 | 20.6 | 0.86 | (0.57, 1.29) | 0.47 | 0.67 |
Referent | 1107 | 65.6 | 128 | 75.3 | 1.00 | |||
Up-Regulated | 196 | 11.6 | 7 | 4.1 | 0.31 | (0.14, 0.68) | 0.004 | 0.04 |
hsa-miR-199b-5p | ||||||||
Down-regulated | 107 | 6.3 | 18 | 10.6 | 1.55 | (0.89, 2.71) | 0.12 | 0.41 |
Referent | 1036 | 61.4 | 137 | 80.6 | 1.00 | |||
Up-Regulated | 544 | 32.2 | 15 | 8.8 | 0.22 | (0.13, 0.38) | <0.0001 | 0.04 |
hsa-miR-203a | ||||||||
Down-regulated | 174 | 10.3 | 17 | 10.0 | 0.70 | (0.40, 1.23) | 0.21 | 0.52 |
Referent | 474 | 28.1 | 71 | 41.8 | 1.00 | |||
Up-Regulated | 1039 | 61.6 | 82 | 48.2 | 0.52 | (0.37, 0.73) | 0.0002 | 0.04 |
hsa-miR-28-3p | ||||||||
Down-regulated | 186 | 11.0 | 16 | 9.4 | 0.95 | (0.55, 1.64) | 0.85 | 0.85 |
Referent | 1380 | 81.8 | 131 | 77.1 | 1.00 | |||
Up-Regulated | 121 | 7.2 | 23 | 13.5 | 1.88 | (1.16, 3.06) | 0.01 | 0.04 |
hsa-miR-30a-5p | ||||||||
Down-regulated | 604 | 35.8 | 64 | 37.6 | 1.00 | (0.71, 1.41) | 1.00 | 1.00 |
Referent | 900 | 53.3 | 101 | 59.4 | 1.00 | |||
Up-Regulated | 183 | 10.8 | 5 | 2.9 | 0.24 | (0.10, 0.61) | 0.003 | 0.04 |
hsa-miR-30e-5p | ||||||||
Down-regulated | 578 | 34.3 | 70 | 41.2 | 1.22 | (0.87, 1.71) | 0.24 | 0.53 |
Referent | 835 | 49.5 | 88 | 51.8 | 1.00 | |||
Up-Regulated | 274 | 16.2 | 12 | 7.1 | 0.43 | (0.23, 0.80) | 0.007 | 0.04 |
hsa-miR-3609 | ||||||||
Down-regulated | 289 | 17.1 | 52 | 30.6 | 1.79 | (1.25, 2.58) | 0.002 | 0.19 |
Referent | 1000 | 59.3 | 108 | 63.5 | 1.00 | |||
Up-Regulated | 398 | 23.6 | 10 | 5.9 | 0.23 | (0.12, 0.45) | <0.0001 | 0.04 |
hsa-miR-3615 | ||||||||
Down-regulated | 378 | 22.4 | 41 | 24.1 | 1.24 | (0.84, 1.83) | 0.27 | 0.54 |
Referent | 1173 | 69.5 | 99 | 58.2 | 1.00 | |||
Up-Regulated | 136 | 8.1 | 30 | 17.6 | 2.41 | (1.53, 3.79) | 0.0001 | 0.04 |
hsa-miR-374b-5p | ||||||||
Down-regulated | 44 | 2.6 | 5 | 2.9 | 0.97 | (0.37, 2.52) | 0.95 | 0.95 |
Referent | 1146 | 67.9 | 160 | 94.1 | 1.00 | |||
Up-Regulated | 497 | 29.5 | 5 | 2.9 | 0.08 | (0.03, 0.19) | <0.0001 | 0.04 |
hsa-miR-3922-5p | ||||||||
Down-regulated | 192 | 11.4 | 8 | 4.7 | 0.45 | (0.22, 0.94) | 0.03 | 0.28 |
Referent | 1318 | 78.1 | 127 | 74.7 | 1.00 | |||
Up-Regulated | 177 | 10.5 | 35 | 20.6 | 2.07 | (1.37, 3.13) | 0.0005 | 0.04 |
hsa-miR-4492 | ||||||||
Down-regulated | 93 | 5.5 | 11 | 6.5 | 1.18 | (0.61, 2.26) | 0.63 | 0.71 |
Referent | 1526 | 90.5 | 143 | 84.1 | 1.00 | |||
Up-Regulated | 68 | 4.0 | 16 | 9.4 | 2.29 | (1.28, 4.10) | 0.005 | 0.04 |
hsa-miR-4533 | ||||||||
Down-regulated | 231 | 13.7 | 27 | 15.9 | 1.27 | (0.81, 1.98) | 0.30 | 0.56 |
Referent | 1311 | 77.7 | 115 | 67.6 | 1.00 | |||
Up-Regulated | 145 | 8.6 | 28 | 16.5 | 2.09 | (1.32, 3.30) | 0.002 | 0.04 |
hsa-miR-484 | ||||||||
Down-regulated | 182 | 10.8 | 11 | 6.5 | 0.57 | (0.30, 1.08) | 0.09 | 0.38 |
Referent | 1307 | 77.5 | 151 | 88.8 | 1.00 | |||
Up-Regulated | 198 | 11.7 | 8 | 4.7 | 0.37 | (0.18, 0.78) | 0.008 | 0.04 |
hsa-miR-513a-3p | ||||||||
Down-regulated | 81 | 4.8 | 7 | 4.1 | 0.84 | (0.38, 1.86) | 0.67 | 0.71 |
Referent | 1575 | 93.4 | 154 | 90.6 | 1.00 | |||
Up-Regulated | 31 | 1.8 | 9 | 5.3 | 2.87 | (1.32, 6.24) | 0.01 | 0.04 |
hsa-miR-520d-3p | ||||||||
Down-regulated | 124 | 7.4 | 16 | 9.4 | 1.33 | (0.76, 2.32) | 0.32 | 0.58 |
Referent | 1495 | 88.6 | 140 | 82.4 | 1.00 | |||
Up-Regulated | 68 | 4.0 | 14 | 8.2 | 2.23 | (1.21, 4.11) | 0.008 | 0.04 |
hsa-miR-532-5p | ||||||||
Down-regulated | 59 | 3.5 | 10 | 5.9 | 1.31 | (0.64, 2.65) | 0.46 | 0.67 |
Referent | 1016 | 60.2 | 153 | 90.0 | 1.00 | |||
Up-Regulated | 612 | 36.3 | 7 | 4.1 | 0.08 | (0.04, 0.17) | <0.0001 | 0.04 |
hsa-miR-5685 | ||||||||
Down-regulated | 337 | 20.0 | 27 | 15.9 | 0.83 | (0.53, 1.29) | 0.41 | 0.66 |
Referent | 1243 | 73.7 | 116 | 68.2 | 1.00 | |||
Up-Regulated | 107 | 6.3 | 27 | 15.9 | 2.75 | (1.71, 4.40) | <0.0001 | 0.04 |
hsa-miR-664a-3p | ||||||||
Down-regulated | 360 | 21.3 | 28 | 16.5 | 0.59 | (0.38, 0.91) | 0.02 | 0.26 |
Referent | 923 | 54.7 | 130 | 76.5 | 1.00 | |||
Up-Regulated | 404 | 23.9 | 12 | 7.1 | 0.22 | (0.12, 0.40) | <0.0001 | 0.04 |
hsa-miR-98-5p | ||||||||
Down-regulated | 40 | 2.4 | 6 | 3.5 | 1.34 | (0.55, 3.26) | 0.52 | 0.67 |
Referent | 1189 | 70.5 | 158 | 92.9 | 1.00 | |||
Up-Regulated | 458 | 27.1 | 6 | 3.5 | 0.10 | (0.04, 0.23) | <0.0001 | 0.04 |
Down-regulated have differential expression <-1.77; referent has differential expression between -1.77, 2.08; up-regulated has differential expression >2.08.