Table 1. Significantly downregulated miRNAs in CRPC.
miRNA | Locus | Log FC | FDR |
---|---|---|---|
CRPC vs non-PCa | |||
miR-145-5p | 5q32 | −4.645 | 1.82E-31 |
miR-221-3p | Xp11.3 | −4.220 | 6.96E-26 |
miR-31-5p | 9p21.3 | −6.354 | 1.89E-24 |
miR-145-3p | 5q32 | −3.930 | 8.42E-19 |
miR-143-5p | 5q32 | −4.198 | 3.94E-18 |
miR-222-3p | Xp11.3 | −4.495 | 8.07E-18 |
miR-221-5p | Xp11.3 | −3.769 | 3.03E-12 |
miR-143-3p | 5q32 | −3.010 | 1.02E-10 |
miR-125b-5p | 11q24.1; 21q21.1 | −3.234 | 1.48E-10 |
miR-150-5p | 19q13.33 | −3.454 | 1.75E-10 |
miR-6510-3p | 17q12 | −6.536 | 1.81E-10 |
miR-99a-5p | 21q21.1 | −2.790 | 7.83E-10 |
miR-100-5p | 11q24.1 | −3.157 | 4.32E-09 |
miR-204-5p | 9q21.13 | −4.540 | 2.11E-08 |
miR-205-5p | 1q32.2 | −8.408 | 2.89E-08 |
miR-187-3p | 18q12.1 | −4.257 | 3.35E-08 |
miR-1247-5p | 14q32.31 | −4.560 | 3.69E-08 |
miR-490-3p | 7q33 | −6.626 | 1.08E-07 |
miR-125b-1-3p | 11q24.1 | −2.774 | 1.90E-07 |
miR-27b-3p | 9q22.33 | −2.382 | 3.59E-07 |
miR-455-5p | 9q33.1 | −2.461 | 5.97E-07 |
miR-100-3p | 11q24.1 | −3.859 | 1.28E-05 |
miR-1271-5p | 5q35.2 | −2.082 | 1.37E-05 |
miR-328-3p | 16q22.1 | −2.112 | 1.55E-05 |
miR-196b-5p | 7p15.2 | −1.740 | 2.59E-05 |
miR-24-3p | 9q22.33; 19p13.12 | −1.699 | 5.98E-05 |
let-7c-3p | 21q21.1 | −4.152 | 6.34E-05 |
miR-184 | 15q25.1 | −4.483 | 8.77E-05 |
miR-133a-5p | 18q11.1; 20q13.33 | −4.170 | 8.77E-05 |
miR-125b-2-3p | 21q21.1 | −2.145 | 8.77E-05 |
miR-873-5p | 9p21.1 | −3.599 | 0.000153 |
miR-9-5p | 1q22; 5q14.3; 15q26.1 | −2.006 | 0.000153 |
miR-504-5p | Xq26.3 | −2.390 | 0.000185 |
miR-27b-5p | 9q22.33 | −2.251 | 0.000208 |
miR-3943 | 7p14.1 | −4.655 | 0.000328 |
miR-548ba | 2p16.3 | −4.650 | 0.000431 |
miR-30e-3p | 1p34.2 | −1.524 | 0.000431 |
miR-214-3p | 1q24.3 | −1.859 | 0.000658 |
miR-125a-5p | 19q13.41 | −2.004 | 0.000681 |
miR-628-5p | 15q21.3 | −2.953 | 0.001013 |
miR-455-3p | 9q33.1 | −2.068 | 0.001769 |
miR-31-3p | 9p21.3 | −4.305 | 0.00182 |
miR-199a-5p | 19p13.2; 1q24.3 | −1.433 | 0.002757 |
miR-133a-3p | 18q11.1; 20q13.33 | −4.055 | 0.002817 |
miR-874-3p | 5q31.2 | −1.646 | 0.003569 |
miR-28-3p | 3q28 | −1.278 | 0.00539 |
miR-23b-3p | 9q22.33 | −1.773 | 0.005713 |
let-7e-3p | 19q13.41 | −1.874 | 0.006138 |
miR-889-3p | 14q32.31 | −1.878 | 0.007487 |
miR-142-5p | 17q22 | −1.503 | 0.007749 |
miR-452-3p | Xq28 | −2.343 | 0.007917 |
miR-199b-5p | 9q34.12 | −1.839 | 0.008345 |
miR-452-5p | Xq28 | −1.670 | 0.009339 |
miR-1260b | 11q21 | −1.873 | 0.010403 |
miR-139-5p | 11q13.4 | −1.411 | 0.013082 |
miR-205-3p | 1q32.2 | −4.128 | 0.01419 |
miR-224-5p | Xq28 | −1.642 | 0.014227 |
miR-23a-3p | 19p13.12 | −1.072 | 0.014881 |
miR-199b-3p | 9q34.12 | −1.488 | 0.016875 |
miR-199a-3p | 19p13.2; 1q24.3 | −1.488 | 0.016905 |
miR-1269a | 4q13.2 | −4.294 | 0.017298 |
miR-944 | 3q28 | −2.426 | 0.017298 |
miR-136-5p | 14q32.31 | −1.714 | 0.018059 |
miR-4634 | 5q35.2 | −1.960 | 0.018527 |
miR-224-3p | Xq28 | −2.339 | 0.03156 |
miR-6511b-3p | 16p13.3; 16p13.11 | −2.237 | 0.03156 |
let-7c-5p | 21q21.1 | −1.701 | 0.035011 |
miR-887-3p | 5p15.1 | −1.345 | 0.035011 |
miR-1260a | 14q24.3 | −2.617 | 0.035037 |
miR-1247-3p | 14q32.31 | −2.996 | 0.03528 |
miR-1298-5p | Xq23 | −3.686 | 0.036895 |
miR-101-5p | 1p31.3 | −1.598 | 0.039947 |
miR-222-5p | Xp11.3 | −3.853 | 0.043768 |
miR-656-3p | 14q32.31 | −2.760 | 0.044013 |
miR-181c-5p | 19p13.12 | −1.622 | 0.045462 |
miR-214-5p | 1q24.3 | −1.373 | 0.047573 |
CRPC vs HSPC | |||
miR-145-5p | 5q32 | −3.140 | 1.70E-05 |
miR-125b-5p | 11q24.1; 21q21.1 | −2.800 | 7.28E-05 |
miR-1247-5p | 14q32.31 | −4.369 | 7.54E-05 |
miR-143-5p | 5q32 | −3.181 | 7.54E-05 |
miR-145-3p | 5q32 | −2.876 | 1.95E-04 |
miR-31-5p | 9p21.3 | −6.095 | 4.08E-04 |
miR-150-5p | 19q13.33 | −3.906 | 7.55E-04 |
miR-221-3p | Xp11.3 | −2.534 | 7.55E-04 |
miR-143-3p | 5q32 | −2.624 | 1.39E-03 |
miR-490-3p | 7q33 | −6.969 | 2.41E-03 |
miR-3943 | 7p14.1 | −4.750 | 3.08E-03 |
miR-9-5p | 1q22; 5q14.3; 15q26.1 | −5.457 | 3.87E-03 |
miR-100-3p | 11q24.1 | −3.618 | 4.19E-03 |
miR-100-5p | 11q24.1 | −2.442 | 4.19E-03 |
miR-196b-5p | 7p15.2 | −2.027 | 4.57E-03 |
miR-125b-1-3p | 11q24.1 | −2.728 | 4.93E-03 |
miR-99a-5p | 21q21.1 | −2.097 | 4.93E-03 |
let-7c-3p | 21q21.1 | −3.956 | 5.91E-03 |
miR-222-3p | Xp11.3 | −2.311 | 6.28E-03 |
miR-221-5p | Xp11.3 | −2.562 | 7.24E-03 |
miR-9-3p | 1q22; 5q14.3; 15q26.1 | −5.538 | 1.22E-02 |
miR-27a-5p | 19p13.12 | −3.290 | 1.22E-02 |
miR-125b-2-3p | 21q21.1 | −2.107 | 1.41E-02 |
miR-27b-3p | 9q22.33 | −1.790 | 1.69E-02 |
miR-142-5p | 17q22 | −2.176 | 2.26E-02 |
miR-1260b | 11q21 | −2.482 | 2.30E-02 |
miR-214-3p | 1q24.3 | −1.811 | 3.02E-02 |
miR-671-3p | 7q36.1 | −1.868 | 3.35E-02 |
miR-205-5p | 1q32.2 | −4.450 | 4.96E-02 |
miR-199b-5p | 9q34.12 | −2.022 | 4.96E-02 |
Abbreviations: FC=fold change; FDR=false discovery rate.