Table 1.
Differentially expressed genes (DEGs) with largest fold changes in BAK1 (Y610F)-Flag relative to BAK1-Flag plants by microarray analysis using Agilent Arabidopsis V4 Arrays.
| Gene locus ID | Gene description | BAK1/Y610F |
|
|---|---|---|---|
| log2 FC | FC | ||
| Up-regulated genes in BAK1 (Y610F)-Flag | |||
| AT4G28520 | Cruciferin 3 (CRC, CRU3) | -2.07 | 0.24 |
| AT5G44120 | Cruciferin A (CRA1, CRU1) | -1.90 | 0.27 |
| AT1G15520 | ATP-binding cassette G40 (ABCG40, PDR12) | -1.82 | 0.28 |
| AT5G35660 | Glycine-rich protein family | -1.65 | 0.32 |
| AT4G12490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | -1.22 | 0.43 |
| AT4G26150 | Cytokinin-responsive gata factor 1 (CGA1, GATA22) | -1.15 | 0.45 |
| AT1G03106 | Hypothetical protein | -1.09 | 0.47 |
| AT5G50600 | Hydroxysteroid dehydrogenase 1 (ATHSD1, HSD1) | -1.08 | 0.47 |
| AT4G26220 | S-adenosyl -L-methionine-dependent methyltransferases superfamily | -1.06 | 0.48 |
| AT2G05580 | Glycine-rich protein family | -1.04 | 0.49 |
| Down-regulated genes in BAK1 (Y610F)-Flag | |||
| AT1G75830∗ | Low-molecular-weight cysteine-rich 67 (LCR67) | 1.58 | 3.00 |
| AT3G22231∗ | Pathogen and circadian controlled 1 (PCC1) | 1.03 | 2.04 |
| AT1G11610 | Cytochrome P450, family 71, subfamily A, polypeptide 18 (CYP71A18) | 0.91 | 1.89 |
| AT4G37610∗ | BTB and TAZ domain protein 5 (BT5) | 0.90 | 1.87 |
| AT3G30720 | qua-quine starch (QQS) | 0.89 | 1.85 |
| AT5G39180∗ | RmlC-like cupins superfamily protein | 0.88 | 1.84 |
| AT4G33070 | Thiamine pyrophosphate dependent pyruvate decarboxylase protein | 0.87 | 1.83 |
| AT3G29970 | B12D protein | 0.86 | 1.81 |
| AT3G59940 | Galactose oxidase/kelch repeat superfamily protein (ATKFB50, KMD4) | 0.84 | 1.80 |
| AT2G44130 | Galactose oxidase/kelch repeat superfamily protein (KFB39, KMD3) | 0.79 | 1.73 |
The asterisk identifies genes selected for qPCR analysis in Figure 3.