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. 2017 Jul 27;8(7):e109. doi: 10.1038/ctg.2017.35

Table 2. Polymorphisms included within the meta-analysis and their association with CRC risk.

Pathway Gene rs number Number of studies Cases/controls Wt allele Minor allele MAF Pooled odds ratio 95% CI I2
Base excision repair APE1 rs1130409 5 4,606/5,000 G G 0.3756 1.15 1.06–1.24 36.38
  MUTYH rs3219489 3 5,230/2,756 G G 0.3135 1.14 0.82–1.58 88.23
  OGG1 rs1052133 13 9,682/1,2938 C G 0.3021 1.05 0.98–1.11 0.00
  PARP1 rs1136410 3 2,132/4,320 T G 0.1969 1.16 1.04–1.30 15.01
  XRCC1 rs1799782 11 6,190/10,454 C A 0.1238 1.30 0.96–1.75 86.98
    rs25487 13 7,981/12,226 G T 0.2604 1.08 0.92–1.26 80.55
    rs25489 3 2,402/3,000 G T 0.0671 1.03 0.83–1.27 0.00
Homologous recombination repair RAD18 rs373572 2 2,074/2,298 A C 0.3524 1.32 1.16–1.49 0.00
  RAD51 rs1801320 5 1,706/1,240 G C 0.1432 0.83 0.50–1.38 85.96
  XRCC3 rs861539 8 3,850/4,566 C A 0.2169 1.15 0.85–1.55 82.90
Mismatch repair MLH1 rs1799977 4 8,252/8,802 A G 0.1296 1.15 0.96–1.37 82.88
  MSH2 rs2303425 2 4,598/5,602 T C 0.1008 1.06 0.94–1.19 0.00
  MSH6 rs1042821 3 6,952/8,174 C A 0.2009 0.98 0.80–1.20 80.04
Nucleotide excision repair ERCC1 rs11615 4 1,890/1,650 C A 0.3311 1.03 0.90–1.18 11.22
  ERCC5 rs17655 6 7,912/8,772 C C 0.3614 1.12 1.06–1.20 0.04
  TP53 rs1042522 12 8,164/10,176 C G 0.4571 1.18 0.97–1.45 89.23
  XPC rs2228000 3 3,680/5,212 C A 0.2330 1.06 0.85–1.32 80.80
    rs2228001 7 6,584/8,930 A G 0.3153 1.08 1.01–1.15 49.46
  XPD rs13181 10 4,932/6,210 G G 0.2366 1.21 0.95–1.54 85.46
    rs1799793 3 1,520/2,244 G T 0.1954 1.13 0.87–1.45 62.01
Direct reversal repair MGMT rs12917 3 1,528/3,332 C T 0.1484 0.81 0.68–0.98 0.00
    rs2308321 3 1,664/7,016 A G 0.0513 0.99 0.82–1.19 0.00

CI, confidence interval; CRC, colorectal cancer; MAF, minor allele frequency; Wt, wild type.

Significant results are in bold.