Table 5.
MAF class | |||||||
---|---|---|---|---|---|---|---|
0.001–0.01 | 0.01–0.05 | 0.05–0.1 | 0.1–0.2 | 0.2–0.3 | 0.3–0.4 | 0.4–0.5 | |
Expectation VR1a | 0.006 | 0.065 | 0.079 | 0.252 | 0.210 | 0.194 | 0.193 |
Expectation VR2a | 0.147 | 0.186 | 0.134 | 0.169 | 0.132 | 0.118 | 0.114 |
Estimateb | 0.059 | 0.149 | 0.025 | 0.053 | 0.299 | 0.417 | 0.002 |
All proportions are scaled to sum to 1 across all MAF classes
aExpectations of the proportion of variance explained based on the assumption of VanRaden’s methods 1 (VR1) and 2 (VR2); see [21]
bEstimated proportion of DRP variance explained for feet and legs using the GREML-MS method with partitioning of imputed sequence variants into seven MAF groups