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. Author manuscript; available in PMC: 2018 Feb 1.
Published in final edited form as: Nat Protoc. 2017 Jan 12;12(2):255–278. doi: 10.1038/nprot.2016.169

FIGURE 5.

FIGURE 5

Screen image of the ClusPro Results page for docking of soybean trypsin inhibitor (ligand) to the porcine trypsin (receptor). The page shows the job name and, by default, results for the balanced set of scoring function coefficients. Results for electrostatic-favored, hydrophobic-favored, or van der Waals + electrostatics sets can be viewed by clicking the corresponding labels. For each parameter set the result page shows small pictures representing the top 10 models, but the user can display more models (up to 30 or less if fewer than 30 clusters have been created). Clicking on the number above a picture will download that model as a PDB file for your viewing. The page also provides the label to download models for all coefficients.