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| Step | Option | Description |
|
| ||
| 8A | Structure Modification | Removal of unstructured terminal residues |
|
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| 8B | Attraction and Repulsion | Setting attraction or repulsion on selected residues |
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| 8C | Restraints | Selection of pairwise distance restraints |
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| 8D | Others Mode | Selecting a special scoring scheme for “other” type complexes |
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| 8E | Antibody Mode | Selecting a special scoring scheme for docking antibody-antigen pairs |
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| 8F | Multimer Docking | Constructing homodimers or homotrimers |
|
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| 8G | SAXS Profile | Accounting for experimental SAXS data |
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| 8H | Heparin Ligand | Global docking of a generic heparin molecule |
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