Table 1.
Description and distribution of aquaporins identified in Zostera marina genome.
| Scaffold |
Protein |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sl. No. | Gene | Phytozome ID | Gene Length (bp) | Location | Start | End | Transcript length (bp) | CDS length (bp) | Length (aa) | mw (kDa) | pI |
| 1 | ZmNIP1-1 | Zosma431g00060 | 1224 | Scaffold_431 | 34873 | 36096 | 906 | 837 | 278 | 29.52 | 8.62 |
| 2 | ZmNIP1-2 | Zosma7531g00010 | 642 | Scaffold_7531 | 636 | 1277 | 642 | 642 | 213 | 22.52 | 9.99 |
| 3 | ZmNIP1-3 | Zosma84g00450 | 1202 | Scaffold_84 | 363618 | 364819 | 879 | 660 | 219 | 23.81 | 5.9 |
| 4 | ZmNIP4-1 | Zosma231g00020 | 964 | Scaffold_231 | 17959 | 18922 | 801 | 801 | 266 | 29.09 | 8.3 |
| 5 | ZmNIP4-2 | Zosma231g00030 | 752 | Scaffold_231 | 29752 | 30503 | 666 | 666 | 221 | 24.43 | 8.59 |
| 6 | ZmNIP5-1 | Zosma22g01220 | 1447 | Scaffold_22 | 939187 | 940633 | 1294 | 765 | 254 | 26.49 | 6.78 |
| 7 | ZmNIP5-2 | Zosma2446g00010 | 1044 | Scaffold_2446 | 1 | 1044 | 891 | 576 | 192 | 19.96 | 9.04 |
| 8 | ZmNIP5-3 | Zosma26g01390 | 873 | Scaffold_26 | 859679 | 860551 | 720 | 720 | 239 | 25.21 | 9.68 |
| 9 | ZmPIP1-1 | Zosma129g00200 | 1252 | Scaffold_129 | 359101 | 360352 | 1172 | 876 | 291 | 31.39 | 8.3 |
| 10 | ZmPIP1-2 | Zosma16g00380 | 1100 | Scaffold_16 | 235799 | 236898 | 708 | 708 | 235 | 25.55 | 8.22 |
| 11 | ZmPIP2-1 | Zosma21g01120 | 1348 | Scaffold_21 | 945011 | 946358 | 1268 | 843 | 280 | 29.97 | 9.54 |
| 12 | ZmPIP2-2 | Zosma49g00340 | 892 | Scaffold_49 | 249623 | 250514 | 819 | 819 | 272 | 28.97 | 8.45 |
| 13 | ZmSIP1-1 | Zosma12g00280 | 2031 | Scaffold_12 | 480219 | 482249 | 1014 | 774 | 257 | 27.63 | 9.63 |
| 14 | ZmSIP1-2 | Zosma221g00210 | 1785 | Scaffold_221 | 86562 | 88346 | 1160 | 726 | 241 | 26.15 | 7.56 |
| 15 | ZmSIP2-1 | Zosma132g00610 | 1209 | Scaffold_132 | 414430 | 415638 | 1115 | 765 | 254 | 28.17 | 10.38 |
| 16 | ZmSIP2-2 | Zosma132g00640 | 940 | Scaffold_132 | 420728 | 421667 | 768 | 768 | 255 | 28.36 | 10.08 |
| 17 | ZmSIP2-3 | Zosma29g00960 | 1005 | Scaffold_29 | 581320 | 582324 | 866 | 816 | 271 | 29.57 | 9.55 |
| 18 | ZmTIP1-1 | Zosma24g00710 | 979 | Scaffold_24 | 469609 | 470587 | 759 | 759 | 252 | 26.39 | 8.65 |
| 19 | ZmTIP1-2 | Zosma31g00130 | 846 | Scaffold_31 | 53817 | 54662 | 756 | 756 | 251 | 25.66 | 5.09 |
| 20 | ZmTIP1-3 | Zosma43g00730 | 907 | Scaffold_43 | 543521 | 544427 | 753 | 753 | 250 | 26.21 | 7.23 |
| 21 | ZmTIP1-4 | Zosma470g00020 | 1553 | Scaffold_470 | 48092 | 49644 | 1397 | 807 | 268 | 28.24 | 6.96 |
| 22 | ZmTIP1-5 | Zosma50g01000 | 1332 | Scaffold_50 | 651788 | 653119 | 1117 | 750 | 249 | 25.98 | 6.68 |
| 23 | ZmTIP1-6 | Zosma127g00340 | 839 | Scaffold_127 | 475276 | 476114 | 759 | 759 | 252 | 25.88 | 6.13 |
| 24 | ZmTIP3-1 | Zosma4g01350 | 950 | Scaffold_4 | 1086053 | 1087002 | 720 | 720 | 239 | 25.44 | 6.97 |
| 25 | ZmTIP5-1 | Zosma31g01330 | 884 | Scaffold_31 | 757025 | 757908 | 813 | 813 | 270 | 28.24 | 6.93 |