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. 2017 Aug 3;8:1438. doi: 10.3389/fmicb.2017.01438

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Copyright © 2017 Belbahri, Chenari Bouket, Rekik, Alenezi, Vallat, Luptakova, Petrovova, Oszako, Cherrad, Vacher and Rateb.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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(A,B) Genome-to-Genome Distance Calculation (GGDC) and Average nucleotide identity (ANI) values between each indicated strains were calculated with GGDC 2 and EzBiocloud web-based programs showed 3 species candidates based on 70% and 95% similarity thresholds. (C) Scatter plot of ANI and GGDC values of B. amyloliquefaciens strains. (D) Maximum Likelihood phylogenomic tree of G-positive bacteria B. amyloliquefaciens strains. L. monocytogenes strain HCC23 was used as outgroup. Supports for branches were assessed by bootstrap resampling of the data set with 1,000 replications.