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. 2017 Aug 3;15(8):e2002925. doi: 10.1371/journal.pbio.2002925

Table 1. Acronym definitions.

Category Acronym Name
Databases Dryad Dryad Digital Repository
GBIF Global Biodiversity Information Facility
GeOMe Genomic Observatories Metadatabase
SRA NCBI's Sequence Read Archive
Organizations EMBL-EBI European Bioinformatics Institute
EMP Earth Microbiome Project
GO Network Genomic Observatories Network
GSC Genomic Standards Consortium
NCBI US National Center for Biotechnology Information
NSF US National Science Foundation
RCN Research Coordination Network
TDWG Biodiversity Information Standards Organization, aka Taxonomic Databases Working Group
Standards MIxS GSC’s Minimum Information about any (x) marker Sequence
RDF Resource Description Framework
DwC Darwin Core, TDWG’s body of standards for sharing information about biological diversity
File formats FASTA Fast Alignment Search Tool-All
FASTQ Fast Alignment Search Tool-Quality
Tools EZID Tool for creating and managing globally-unique, long-term identifiers for data
FIMS Biocode Field Information Management System