Table 2. Read abundance of MtPUB genes in the drought-0, drought-2, drought-6, and drought-12 libraries.
Gene_ID | Drought-0 | Drought-2 | Drought-6 | Drought-12 | log2 (Drought-2/ Drought-0) |
log2 (Drought-6/ Drought-0) |
log2 (Drought-12/ Drought-0) |
---|---|---|---|---|---|---|---|
MtPUB1 | 79 | 146 | 178 | 111 | 0.89 | 1.17* | 0.49 |
MtPUB2 | 59 | 27 | 13 | 4 | -1.11* | -2.17* | -3.91* |
MtPUB3 | 69 | 41 | 14 | 13 | -0.76 | -2.29* | -2.45* |
MtPUB4 | 158 | 76 | 41 | 14 | -1.05* | -1.97* | -3.49* |
MtPUB5 | 62 | 176 | 53 | 55 | 1.51* | -0.23 | -0.16 |
MtPUB6 | 299 | 200 | 91 | 131 | -0.58 | -1.71* | -1.19* |
MtPUB7 | 348 | 841 | 784 | 717 | 1.27* | 1.17* | 1.04* |
MtPUB8 | 3 | 6 | 1 | 4 | 1.07* | -1.53* | 0.44 |
MtPUB9 | 941 | 633 | 624 | 343 | -0.57 | -0.59 | -1.46* |
MtPUB10 | 10 | 11 | 23 | 35 | 0.09 | 1.13* | 1.72* |
MtPUB11 | 4 | 4 | 1 | 2 | -0.12 | -1.94* | -0.64 |
MtPUB12 | 5 | 9 | 9 | 7 | 0.85 | 0.86 | 0.51 |
MtPUB13 | 463 | 911 | 1106 | 901 | 0.98 | 1.26* | 0.96 |
MtPUB14 | 393 | 446 | 539 | 442 | 0.18 | 0.46 | 0.17 |
MtPUB15 | 2 | 3 | 2 | 2 | 0.47 | 0.11 | 0.34 |
MtPUB16 | 1 | 1 | 1 | 1 | 0 | 0 | 0 |
MtPUB17 | 520 | 730 | 1218 | 905 | 0.49 | 1.23* | 0.80 |
MtPUB18 | 51 | 155 | 122 | 67 | 1.59* | 1.25* | 0.38 |
MtPUB19 | 526 | 661 | 798 | 914 | 0.33 | 0.60 | 0.80 |
MtPUB20 | 449 | 393 | 191 | 232 | -0.19 | -1.23* | -0.95 |
MtPUB21 | 448 | 478 | 281 | 325 | 0.09 | -0.67 | -0.46 |
MtPUB22 | 119 | 336 | 237 | 176 | 1.50* | 1.00* | 0.57 |
MtPUB23 | 174 | 96 | 452 | 560 | -0.85 | 1.38* | 1.69* |
MtPUB24 | 444 | 449 | 484 | 468 | 0.02 | 0.13 | 0.08 |
MtPUB25 | 274 | 304 | 286 | 354 | 0.15 | 0.06 | 0.37 |
MtPUB26 | 219 | 340 | 233 | 222 | 0.63 | 0.09 | 0.02 |
MtPUB27 | 143 | 143 | 69 | 46 | 0.00 | -1.05* | -1.63* |
MtPUB28 | 1009 | 1266 | 1309 | 1224 | 0.33 | 0.38 | 0.28 |
MtPUB29 | 768 | 883 | 1182 | 953 | 0.20 | 0.62 | 0.31 |
MtPUB30 | 361 | 308 | 313 | 283 | -0.23 | -0.21 | -0.35 |
MtPUB31 | 26 | 362 | 60 | 36 | 3.82* | 1.23* | 0.49 |
MtPUB32 | 1348 | 1690 | 1839 | 1330 | 0.33 | 0.45 | -0.02 |
MtPUB33 | 159 | 328 | 150 | 165 | 1.04* | -0.08 | 0.05 |
MtPUB34 | 238 | 209 | 254 | 251 | -0.19 | 0.09 | 0.07 |
MtPUB35 | 47 | 1924 | 3780 | 3587 | 5.34* | 6.32* | 6.24* |
MtPUB36 | 461 | 771 | 700 | 702 | 0.74 | 0.60 | 0.61 |
MtPUB37 | 561 | 394 | 355 | 321 | -0.51 | -0.66 | -0.81 |
MtPUB38 | 169 | 233 | 97 | 81 | 0.47 | -0.81 | -1.05* |
MtPUB39 | 415 | 462 | 571 | 540 | 0.15 | 0.46 | 0.38 |
MtPUB40 | 688 | 662 | 176 | 184 | -0.06 | -1.97* | -1.91* |
MtPUB41 | 405 | 361 | 681 | 712 | -0.16 | 0.75 | 0.81 |
MtPUB42 | 36 | 439 | 1544 | 912 | 3.61* | 5.42* | 4.66* |
MtPUB43 | 10 | 70 | 10 | 27 | 2.87* | 0.04 | 1.52* |
MtPUB44 | 226 | 1168 | 693 | 341 | 2.37* | 1.62* | 0.60 |
MtPUB45 | 6 | 21 | 9 | 5 | 1.90* | 0.60 | -0.09 |
MtPUB46 | 208 | 95 | 109 | 96 | -1.13* | -0.94 | -1.11* |
MtPUB47 | 1422 | 1781 | 2647 | 2632 | 0.32 | 0.90 | 0.89 |
MtPUB48 | 32 | 99 | 32 | 45 | 1.62* | -0.02 | 0.47 |
MtPUB49 | 279 | 153 | 160 | 143 | -0.87 | -0.80 | -0.97 |
MtPUB50 | 178 | 126 | 136 | 154 | -0.50 | -0.39 | -0.21 |
MtPUB51 | 119 | 110 | 113 | 127 | -0.10 | -0.07 | 0.09 |
MtPUB52 | 806 | 1059 | 1823 | 2081 | 0.39 | 1.18* | 1.37* |
MtPUB53 | 1 | 1 | 1 | 1 | 0 | 0 | 0 |
MtPUB54 | 222 | 156 | 237 | 157 | -0.51 | 0.10 | -0.50 |
MtPUB55 | 96 | 436 | 89 | 29 | 2.19* | -0.11 | -1.74* |
MtPUB56 | 261 | 284 | 156 | 220 | 0.12 | -0.74 | -0.24 |
MtPUB57 | 832 | 1663 | 1887 | 1736 | 1.00* | 1.18* | 1.06* |
MtPUB58 | 230 | 300 | 244 | 241 | 0.38 | 0.09 | 0.07 |
MtPUB59 | 328 | 584 | 609 | 728 | 0.83 | 0.89 | 1.15* |
MtPUB60 | 1 | 1 | 6 | 1 | 0 | 2.70* | 0 |
MtPUB61 | 262 | 456 | 431 | 470 | 0.80 | 0.72 | 0.84 |
MtPUB62 | 1125 | 1514 | 1961 | 1846 | 0.43 | 0.80 | 0.71 |
MtPUB63 | 149 | 135 | 76 | 67 | -0.14 | -0.98 | -1.16* |
MtPUB64 | 2 | 10 | 16 | 1 | 2.41* | 3.07* | -0.96 |
Values indicate number of reads.
* indicates a significant difference in expression compared to the 0 h time point (P < 0.01 and |log2N| ≥ 1). Drought-0, Drought-2, Drought-6, and Drought-12 indicate 0, 2, 6, and 12 h drought treatment, respectively.