Table 2.

The 10 most significant SNPs for genome-wide association analyses testing for an interaction between SNP effects and temperature, ordered by significance.

SNP	Chr	Genome pos.	p-value	MAF	Ref. allele	Gene symbol	Gene name
AX-100216683	3	68133962	7.29e-07	0.457	G
AX-100724221	2	143054586	2.69e-06	0.383	G	TG	Thyroglobulin
AX-100140360	7	22714628	2.78e-06	0.328	G
AX-100642627	2	44169247	2.86e-06	0.377	C
AX-100451185	3	66153471	4.29e-06	0.179	T	HS3STS	Heparan sulfate-glucosamine 3-sulfotransferase 5
AX-100648937	11	19517225	5.19e-06	0.200	T
AX-100709598	1	83156541	7.15e-06	0.337	G	TENM4	Teneurin transmembrane protein 4
AX-100983019	2	61825937	8.91e-06	0.270	A
AX-100667139	2	44170225	1.00e-05	0.350	G
AX-100513411	4	39192295	1.44e-05	0.256	C

Given are SNP name, on which chromosome it is located (Chr), physical genome position in great tit reference genome (Genome position), p-values of GWA analyses, minor allele frequencies (MAF), reference allele and symbols and names of associated genes. Critical p-value after Bonferroni correction was 1.30e-07. SNPs were assigned to genes based on their genomic position by using the great tit reference annotation (NCBI Parus major Annotation Release 101).