Figure 3. Overview of confidence in ancestral state reconstructions across all traits (X axis), focal nodes (Y axis) and sets of trees (panels).

Confidence scores on a three-star scale were attributed for each trait-node combination based on the cross-comparison of MP, ML and rjMCMC results and the lower bound of the rjMCMC credibility intervals (see Supplementary Discussion for details). A more detailed version of this figure with row and column captions is provided in Supplementary Data 1. Light=low confidence; dark=high confidence.