Table IV. Comparative GWAS results for stem diameter indicating those significant SNPs consistently identified by more than one methodology.
| SNP |
IPaS-Di |
DenS-Di |
Manuala |
||||||
|---|---|---|---|---|---|---|---|---|---|
| −log10 (P) | q | R2 | −log10 (P) | q | R2 | −log10 (P) | q | R2 | |
| S1_69372 | 4.495 | 0.216 | 0.085 | 4.384 | 0.262 | 0.090 | |||
| S1_4119171 | 4.240 | 0.221 | 0.055 | 5.143 | 0.104 | 0.077 | |||
| S1_4119134 | 3.887 | 0.250 | 0.049 | 4.491 | 0.104 | 0.065 | |||
| S1_72411757 | 3.665 | 0.258 | 0.051 | 4.209 | 0.262 | 0.063 | |||
| S4_4624396 | 3.778 | 0.250 | 0.063 | 5.481 | 0.262 | 0.101 | |||
| S5_62102924 | 3.725 | 0.250 | 0.058 | 4.655 | 0.262 | 0.076 | |||
| S7_59261924 | 3.591 | 0.268 | 0.047 | 4.391 | 0.104 | 0.067 | |||
| S7_59261932 | 3.591 | 0.268 | 0.047 | 4.391 | 0.104 | 0.067 | |||
| S7_59261938 | 3.591 | 0.268 | 0.047 | 4.391 | 0.104 | 0.067 | |||
| S8_46997924 | 3.595 | 0.268 | 0.050 | 4.378 | 0.262 | 0.067 | |||
a
Data collected manually in 2010 and published by Zhao et al. (2016).