Skip to main content
. 2017 Jul 10;114(30):E6117–E6126. doi: 10.1073/pnas.1700939114

Table S1.

RT-qPCR–based validation of microarray experiments

Fold change transcription P value transcription Fold change polysome P value polysome Transcription (qPCR) Translation
Probe Gene Array qPCR Array qPCR Array qPCR Array qPCR Down in Lck−/− Down in Lck−/− (array) Down in Lck−/− (qPCR)
A_55_P1980796 Il2ra (CD25) −1.32 −1.29 0.006 0.431 −3.57 −2.80 0.001 0.041 No Yes Yes
A_51_P181286 CD69 1.04 1.25 0.218 0.652 −1.81 −1.27 0.264 0.181 No No No
A_55_P1974877 BclxL 1.05 1.27 0.282 0.461 −2.86 −3.14 0.008 0.005 No Yes Yes
A_52_P1197913 Gadd45b 1.52 1.58 0.779 0.359 −2.86 −2.29 0.011 0.002 No Yes Yes
A_52_P108346 Myc 1.14 1.06 0.779 0.847 −2.02 −3.70 0.138 0.024 No No Yes
A_52_P99848 Pik3cd 1.37 −1.11 0.994 0.794 −2.21 −1.64 0.088 0.043 No No Yes
A_52_P68893 IFNg 1.47 2.11 0.203 0.217 −2.81 −2.32 0.018 0.004 No Yes Yes
A_51_P391445 Ifngr1 1.52 1.11 0.934 0.716 −2.46 −1.44 0.050 0.012 No Yes Yes
A_51_P286496 Il2rb 1.31 −1.24 0.998 0.413 −2.87 −3.40 0.009 0.029 No Yes Yes
A_51_P470715 Cish 1.51 −1.00 0.998 0.995 −2.91 −4.74 0.009 0.028 No Yes Yes
A_51_P279606 Socs1 1.63 −1.14 1.000 0.717 −1.59 −1.62 0.355 0.089 No No No
A_51_P474459 Socs3 1.78 −0.97 1.000 0.929 −1.87 −6.54 0.252 0.024 No No Yes
A_55_P2085157 Eef1g 1.07 1.01 0.975 0.986 −1.30 −1.19 0.477 0.478 No No No
A_66_P106191 Eef2 1.06 −1.34 0.882 0.305 −1.98 −1.86 0.204 0.225 No No No
A_55_P2128451 Sfpq −1.00 1.19 0.398 0.748 −2.45 −1.97 0.037 0.010 No Yes Yes

Total transcript abundance and polysome:subpolysome ratio of 15 genes involved in T-cell activation, signaling pathways, effector function, and survival were measured by quantitative PCR using the same biological samples as those used in the microarrays (n = 4, two-way t test, P value threshold 0.05). Validated significant P values are highlighted in bold.