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. 2017 Jul 4;6(8):1–13. doi: 10.1093/gigascience/gix052

Table 1:

Summary of results of genetic distance-based evaluations of the AusPreda_12S mini-barcode

FULL (1% threshold) UNIQUE (3.5% threshold)
Correct/true Incorrect/false Ambiguous No ID Correct/true Incorrect/false Ambiguous No ID
Nearest neighbour 155 19 44 0
Best close match 147 3 0 24 42 0 0 2
Thresh ID 142 3 5 24 42 0 0 2
FULL (3.5% threshold)
Correct/true Incorrect/false Ambiguous No ID
Best close match 152 6 0 16
Thresh ID 141 5 12 16

Summary of results of genetic distance-based evaluations of the AusPreda_12S mini-barcode conducted using the R package SPIDER to analyse the “FULL” (at 1% and 3.5% thresholds) and “UNIQUE” (at 3.5% threshold) reference sequence databases. The thresholds were calculated based on the minimum cumulative error (Additional file 6), and the 3.5% threshold for the “FULL” database allows for comparison between the 2 databases. The specified genetic distance thresholds were used for the BestCloseMatch and ThreshID analyses.