Fig. 1.

Haplotype block organization of SNPs related to high-density lipoprotein cholesterol level on the LD maps for the Hungarian general (A) and Roma (B) populations. Linkage analyses were performed separately in the study populations. According to the LD map generated by Haploview, there are four haplotype blocks (outlined in a bold black line) consisting of variants that are in high LD. The blocks were formed by the SNPs of the CETP, LIPC and GALNT2 genes. The numbers above the map show the rs numbers of SNPs. The colour scheme is a standard Haploview colour scheme (white D′<1 and LOD<2, shades of pink/red: D′<1 and LOD≥2, and bright red D′=1 and LOD≥2). Numbers in squares are D′ values.