Table 1.
Shorthand | Description | Mode | Method | Reference |
---|---|---|---|---|
Vrest | Resting membrane potential | I Clamp | Direct measurement | N/A |
Cm | Membrane capacitance | I Clamp | See reference | Golowasch et al., 2009 |
Rm | Input resistance | |||
Ncomps | Number of model compartments | |||
Ih_sag | Hyperpolarization-induced depolarizing potential | I Clamp | IH,sag = Vinit − Vss | N/A |
Ih_current | Hyperpolarization-induced depolarizing current | V Clamp | IH,curr = Iinit − Iss | N/A |
EPSC_freq | Mean spontaneous EPSC frequency | V Clamp | Direct measurement after waveform sorting | Hendrickson et al., 2008 |
EPSC_amp | Mean spontaneous EPSC amplitude | V Clamp | ||
EPSC_tau | Mean spontaneous EPSC decay constant | V Clamp | Least-squares exponential decay | N/A |
S_freq_1 | Spiking frequency: Lv. 1 | I Clamp | Direct measurement | N/A |
S_freq_2 | Spiking frequency: Lv. 2 | I Clamp | Direct measurement | N/A |
S_freq_3 | Spiking frequency: Lv. 3 | I Clamp | Direct measurement | N/A |
S_freq_4 | Spiking frequency: Lv. 4 | I Clamp | Direct measurement | N/A |
S1_slope | Initial action potential rising slope | I Clamp | Initial spike derivative peak | Meeks et al., 2005 |
S1_thresh | Initial action potential threshold | I Clamp | Vm at 10% of initial spike derivative | |
S_accom_1 | Spike rate accommodation: Lv. 1 | I Clamp | N/A | |
S_accom_2 | Spike rate accommodation: Lv. 2 | I Clamp | ||
S_accom_3 | Spike rate accommodation: Lv. 3 | I Clamp | ||
S_accom_4 | Spike rate accommodation: Lv. 4 | I Clamp | ||
Na_curr_1 | Voltage-gated sodium current amplitude: Lv. 1 | V Clamp | Direct measurement | N/A |
Na_curr_2 | Voltage-gated sodium current amplitude: Lv. 2 | V Clamp | Direct measurement | N/A |
Na_curr_3 | Voltage-gated sodium current amplitude: Lv. 3 | V Clamp | Direct measurement | N/A |
Na_curr_4 | Voltage-gated sodium current amplitude: Lv. 4 | V Clamp | Direct measurement | N/A |
Na_curr_5 | Voltage-gated sodium current amplitude: Lv. 5 | V Clamp | Direct measurement | N/A |
K_curr_max | Voltage-gated potassium current: maximum | V Clamp | Direct measurement | N/A |
K_curr_diff | Noninactivating voltage-gated potassium current | V Clamp | Direct measurement | N/A |
N/A, Not applicable; Lv., level; V Clamp, voltage clamp; I Clamp, current clamp.