Table 1.
Isolate name | Sequence type | Clonal complex | Date | Source | Locationa | Vitek antibiogramb | Resistance genes | Virulence genes | ERR accession | LA-MRSA |
---|---|---|---|---|---|---|---|---|---|---|
CBLA1 c | 97 | 97 | 01/13 | Screen swab | GP | PEN, FOX, OXA | blaZ, mecA, cadD | scn, sak | ERR715294 | No |
CBLA2 c | 97 | 97 | 01/13 | Screen swab | HOS | PEN, FOX, OXA | blaZ, mecA, cadD | scn, sak | ERR737075 | No |
CBLA3 | 1945 | 130 | 08/12 | Screen swab | HOS | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | scn, sak, edin-B, etd2 | ERR701929 | Yes |
CBLA4 | 1245 | 130 | 09/12 | Screen swab | HOS | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR714935 | Yes |
CBLA5 | CC130 | 130 | 02/13 | Screen swab | HOS | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC, cadD | edin-B, etd2 | ERR737232 | Yes |
CBLA6 | 1245 | 130 | 03/13 | SSTI | HOS | PEN, FOX, ERY | msrA, smr (qacC), blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR737543 | Yes |
CBLA7 | 130 | 130 | 03/13 | Screen swab | HOS | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR737555 | Yes |
CBLA8 d | 1245 | 130 | 06/12 | Screen swab | GP | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR737640 | Yes |
CBLA9 | 2574 | 130 | 05/12 | SSTI | GP | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR204178 | Yes |
CBLA10 d | 1245 | 130 | 05/12 | Screen swab | HOS | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR211963 | Yes |
CBLA11 | 1245 | 130 | 06/12 | Screen swab | HOS | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR212880 | Yes |
CBLA12 | 1245 | 130 | 06/12 | Screen swab | HOS | PEN, FOX, OXA | blaZ LGA251 , mecC, arsB, arsC | edin-B, etd2 | ERR212993 | Yes |
CBLA13 | 398 | 398 | 04/13 | Screen swab | HOS | PEN, FOX, OXA, ERY, TET, CLI | blaZ, mecA, ermC, tetM, tetK, | vwb (SaPI encoded) | ERR715120 | Yes |
CBLA14 | 425 | 425 | 01/13 | Screen swab | HOS | PEN, FOX, | blaZ LGA251 , mecC, arsB, arsC, cadD | ERR737103 | Yes | |
CBLA15 | 1943 | 1943 | 03/13 | SSTI | GP | PEN, FOX | blaZ LGA251 , mecC, arsB, arsC, cadD | tst (SaPIbov), seg, sei | ERR737480 | Yes |
aLocation: HOS = Hospital, GP = General practitioner. bVitek antibiogram: Three letter codes indicate resistance to: PEN = Benzlpenicillin, FOX = Cefoxitin, OXA = Oxacillin, FUS = Fusidic acid, ERY = Erythromycin, TET = Tetracycline, CLI = Clindamycin. Bold text - cdenotes that CBLA1 and CBLA2 were isolated from the same patient. ddenotes that CBLA8 and CBLA10 were isolated from the same patient. SSTI = skin and soft tissue infection.