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. 2017 Aug 7;18:362. doi: 10.1186/s12859-017-1774-x

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© The Author(s) 2017

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 7 — Replication threshold from coverage. The upper plot shows how much of A. thaliana chromosome 3 will be kept for downstream analysis as a function of the signal threshold. The lower plot shows the chromosome coverage differential as a function of the threshold. The vertical red line in each plot marks the optimal threshold of 0.92