Table 3.
Prophages predicted in the three ST201 genomes
| Phage region | Region length (kb) | Completeness | #CDS | Possible phage | GC (%) |
|---|---|---|---|---|---|
| Strain LC693 | |||||
| 1 | 28.3 | Incomplete | 24 | PHAGE_Clostr_phiCD505_NC_028764 (6) | 27.38 |
| 2 | 19.7 | Incomplete | 47 | PHAGE_Clostr_CDMH1_NC_024144 (21) | 28.15 |
| 3 | 71.7 | Intact | 102 | PHAGE_Clostr_phiCDHM19_NC_028996 (35) | 29.33 |
| 4 | 27.1 | Incomplete | 31 | PHAGE_Clostr_phiCDHM19_NC_028996 (11) | 28.04 |
| 5 | 7.4 | Questionable | 6 | PHAGE_Paenib_Xenia_NC_028837 (2) | 30.32 |
| 6 | 67.2 | Intact | 88 | PHAGE_Clostr_phiMMP02_NC_019421 (30) | 28.69 |
| 7 | 24.1 | Intact | 45 | PHAGE_Clostr_c_st_NC_007581 (6) | 33.26 |
| Strain VL-0104 | |||||
| 1 | 22.4 | Incomplete | 19 | PHAGE_Clostr_c_st_NC_007581 (3) | 28.77 |
| 2 | 48.3 | Intact | 58 | PHAGE_Clostr_CDMH1_NC_024144 (22) | 28.44 |
| 3 | 27.1 | Incomplete | 31 | PHAGE_Clostr_phiCDHM19_NC_028996 (11) | 28.04 |
| 4 | 48.4 | Intact | 69 | PHAGE_Clostr_phiCD505_NC_028764 (24) | 28.27 |
| 5 | 7.4 | Questionable | 6 | PHAGE_Paenib_Xenia_NC_028837 (2) | 30.32 |
| 6 | 15.6 | Incomplete | 27 | PHAGE_Clostr_phiCD27_NC_011398 (14) | 29.98 |
| 7 | 11.2 | Questionable | 18 | PHAGE_Clostr_c_st_NC_007581 (4) | 31.68 |
| Strain VL-0391 | |||||
| 1 | 22.6 | Incomplete | 18 | PHAGE_Clostr_c_st_NC_007581 (3) | 28.79 |
| 2 | 33.3 | Intact | 39 | PHAGE_Clostr_phiMMP03_NC_028959 (8) | 27.45 |
| 3 | 27.1 | Incomplete | 31 | PHAGE_Clostr_phiCDHM19_NC_028996 (11) | 28.04 |
| 4 | 51.4 | Intact | 69 | PHAGE_Clostr_phiCD505_NC_028764 (23) | 28.06 |
| 5 | 7.4 | Questionable | 6 | PHAGE_Paenib_Xenia_NC_028837 (2) | 30.32 |
| 6 | 34.9 | Questionable | 37 | PHAGE_Clostr_CDMH1_NC_024144 (15) | 31.25 |
| 7 | 25.3 | Incomplete | 34 | PHAGE_Clostr_phiCD27_NC_011398 (12) | 31.52 |
| 8 | 11.1 | Intact | 23 | PHAGE_Clostr_c_st_NC_007581 (3) | 32.47 |