Table 4.
SNPs identified in the ST201 genomes against the ST1 and the ST11 genomes
Nos. of SNPs | Non-synonymous | Synonymous | DN/dS | |
---|---|---|---|---|
LC693 vs. R20291 | 54,837 (41,696a) | 15,172 | 26,524 | 0.57 |
VL-0104 vs. R20291 | 52,580 (39,912a) | 14,687 | 25,225 | 0.58 |
VL-0319 vs. R20291 | 52,447 (39,065a) | 14,127 | 24,938 | 0.57 |
Subtotal | 159,864 (120,673a) | 43,986 | 76,687 | 0.57 |
LC693 vs. M120 | 107,738 (82,855a) | 25,643 | 57,212 | 0.45 |
VL-0104 vs. M120 | 107,889 (82,872a) | 26,258 | 56,614 | 0.46 |
VL-0319 vs. M120 | 107,694 (81,424a) | 25,046 | 56,378 | 0.44 |
Subtotal | 323,321 (247,151a) | 76,947 | 170,204 | 0.45 |
aIndicates the number of SNPs in CDSs