Table S5.
ETNP sequencing statistics
| Year | Stn | Depth, m | Total | Read length, bp | nonrRNA | DIAMOND | MEGAN bacteria | MEGAN archaea | MEGAN Prok | Accession |
| 2013 | 6 | 30 | 1,521,531 | 203 | 1,053,980 | 108,873 | 62,934 | 5,476 | 68,410 | PRJNA263621* |
| 85 | 1,364,985 | 201 | 294,080 | 175,178 | 115,127 | 4,935 | 120,062 | PRJNA263621* | ||
| 100 | 1,024,593 | 214 | 218,551 | 158,677 | 115,316 | 1,922 | 117,238 | PRJNA263621* | ||
| 125 | 1,494,459 | 204 | 377,156 | 256,113 | 174,678 | 4,559 | 179,237 | PRJNA263621* | ||
| 300 | 712,020 | 212 | 159,091 | 110,937 | 78,842 | 2,389 | 81,231 | PRJNA263621* | ||
| 2014 | 4 | 60 | 2,302,732 | 197 | 417,033 | 232,758 | 126,802 | 6,986 | 133,788 | PRJNA305951 |
| 100 | 2,520,169 | 199 | 805,179 | 359,336 | 258,010 | 15,993 | 274,003 | PRJNA305951 | ||
| 150 | 1,291,622 | 208 | 310,389 | 183,424 | 128,402 | 6,995 | 135,397 | PRJNA305951 | ||
| 200 | 1,212,126 | 205 | 253,637 | 155,219 | 110,453 | 5,938 | 116,391 | PRJNA305951 | ||
| 6 | 75 | 4,786,146 | 164 | 957,802 | 298,788 | 187,702 | 63,517 | 251,219 | PRJNA277357† | |
| 80 | 1,407,348 | 183 | 591,754 | 165,806 | 80,047 | 41,583 | 121,630 | PRJNA305951 | ||
| 100 | 1,601,640 | 183 | 611,712 | 192,294 | 133,385 | 13,799 | 147,184 | PRJNA305951 | ||
| 150 | 1,452,296 | 202 | 359,133 | 169,271 | 113,485 | 14,564 | 128,049 | PRJNA305951 | ||
| 200 | 2,325,341 | 177 | 482,694 | 210,303 | 158,319 | 5,971 | 164,290 | PRJNA305951 | ||
| 300 | 18,781,558 | 185 | 7,710,908 | 1,645,992 | 1,540,161 | 51,789 | 1,591,950 | PRJNA277357† | ||
| 10 | 100 | 2,149,661 | 192 | 439,535 | 106,713 | 62,268 | 3,823 | 66,091 | PRJNA277357† | |
| 150 | 4,523,472 | 166 | 1,276,310 | 495,416 | 416,236 | 14,970 | 431,206 | PRJNA277357† | ||
| 300 | 1,335,682 | 194 | 439,535 | 226,427 | 187,523 | 6,458 | 193,981 | PRJNA277357† |
Stn, stations in the ETNP; Total, number of sequences post trimming, merging, and quality control; Read length, average read length (bp) of merged and quality controlled sequences; nonrRNA, number of nonrRNA reads; DIAMOND, number of sequences with DIAMOND matches (bit score >50) to protein-coding sequences in the NCBI-nr database; MEGAN bacteria, number of reads assigned to the bacteria node using the lowest common ancestor (LCA) algorithm in MEGAN5; MEGAN archaea, number of reads assigned to the archaea node using the LCA algorithm in MEGAN5; MEGAN Prok, the sum of bacteria and archaea-assigned reads by the LCA algorithm; and Accession, NCBI accession number or BioProject ID.
Samples collected in 2013 published in Ganesh et al. (8).
Samples collected in 2014 published in Padilla et al. (35).