Table 2. Comparison of genomic region lengths and similarities between members of the YFV group and FRV*.
| Genomic region |
Virus |
| FRV |
|
SEPV |
|
WESSV |
|
YFV | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| nt |
aa |
nt |
aa |
nt |
aa |
nt |
aa |
||||
| 5′ UTR | 117 | NA | 116 (94) | NA | 118 (92) | NA | 118 (52) | NA | |||
| Capsid | 348 | 116 | 348 (77) | 116 (84) | 348 (74) | 116 (78) | 363 (54) | 121 (39) | |||
| Premembrane | 267 | 89 | 267 (78) | 89 (94) | 267 (73) | 89 (87) | 267 (59) | 89 (59) | |||
| Membrane | 225 | 75 | 225 (80) | 75 (96) | 225 (74) | 75 (87) | 225 (58) | 75 (47) | |||
| Envelope | 1,470 | 490 | 1,470 (81) | 490 (96) | 1,470 (79) | 490 (93) | 1,479 (63) | 493 (54) | |||
| NS1 | 1,059 | 353 | 1,059 (79) | 353 (93) | 1,059 (76) | 353 (87) | 1,056 (63) | 352 (64) | |||
| NS2a | 678 | 226 | 678 (78) | 226 (88) | 678 (77) | 226 (85) | 672 (54) | 224 (40) | |||
| NS2b | 390 | 130 | 390 (78) | 130 (88) | 390 (76) | 130 (88) | 390 (56) | 130 (50) | |||
| NS3 | 1,869 | 623 | 1,869 (79) | 623 (93) | 1,869 (77) | 623 (92) | 1,869 (67) | 623 (71) | |||
| NS4a | 378 | 126 | 378 (75)) | 126 (87) | 378 (75) | 126 (92) | 378 (61) | 126 (57) | |||
| 2k | 69 | 23 | 69 (71) | 23 (70) | 69 (74) | 23 (91) | 69 (61) | 23 (57) | |||
| NS4b | 744 | 248 | 744 (79) | 248 (94) | 744 (77) | 248 (91) | 750 (66) | 250 (64) | |||
| NS5 | 2,721 | 906 | 2,721 (78) | 906 (88) | 2,721 (76) | 906 (89) | 2,718 (66) | 905 (68) | |||
| 3′ UTR | 472 | NA | 459 (86) | NA | 478 (84) | NA | 508 (65) | NA | |||
| Polyprotein | 10,218 | 3,405 | 10,218 (79) | 3,405 (91) | 10,218 (77) | 3,405 (89) | 10,236 (63) | 3,411 (61 | |||
| Full genome | 10,807 | NA | 10,793 (79) | NA | 10,814 (77) | NA | 10,862 (62) | NA | |||
*Values are sequence length (% identity with FRV). FRV, Fitzroy River virus (GenBank accession no. KM 361634); NS, nonstructural; SEPV, Sepik virus (GenBank accession no. NC008719); UTR, untranslated region; WESSV, Wesselsbron virus (accession no. JN226796); YFV, yellow fever virus (X03700); NA, not applicable.