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. 2005 Mar 7;102(11):3984–3987. doi: 10.1073/pnas.0501038102

Table 1. Thermodynamic stability, folding speed, and φ values for WT and point-mutated apo-azurin variants (pH 7, 25°C).

Apo-azurin variant Mutated β-strand ΔGU(H2O), kJ/mol ΔΔGU(H2O), kJ/mol kF(H2O), s-1 ΔΔG(H2O), kJ/mol φ
WT 25.0 ± 0.7 160 ± 20
Val-31—Ala 3 20.0 ± 0.4 -5.0 ± 0.7 23 ± 3 -4.72 ± 0.3 0.93 ± 0.14
Leu-33—Ala 3 21.0 ± 0.3 -4.0 ± 0.7 35 ± 2 -3.70 ± 0.3 0.91 ± 0.18
Trp-48—Ala 4 4.0 ± 0.3 -21.0 ± 0.7 22 ± 6 -4.83 ± 0.7 0.23 ± 0.03§
Leu-50—Ala 4 18.0 ± 0.2 -7.0 ± 0.7 5 ± 1 -7.3 ± 0.3 1.04 ± 0.11
Val-95—Ala 6 22.5 ± 0.2 -2.5 ± 0.7 78 ± 3 -1.75 ± 0.3 0.63 ± 0.21
Phe-97—Ala 6 15.0 ± 0.7 -10.0 ± 0.7 40 ± 6 -3.38 ± 0.3 0.35 ± 0.04
Tyr-108—Ala 7 12.5 ± 0.2 -12.5 ± 0.7 23 ± 3 -4.72 ± 0.3 0.37 ± 0.03
Phe-110—Ala 7 11.0 ± 0.9 -14.0 ± 0.9 54 ± 5 -2.64 ± 0.3 0.19 ± 0.02

The φ values are calculated as φ = ΔΔG(H2O)/ΔΔGU(H2O), where ΔΔGU(H2O) is calculated as ΔGU(mutant,H2O)-ΔGU(WT,H2O) and ΔΔG(H2O) as RTln[kf(mutant,H2O)/kf(WT,H2O)].

Standard deviations (σ) for the φ values were calculated as in ref. 19: σφ = |φ|*√[(σΔΔG‡/ΔΔG)2+(σΔΔGU/ΔΔGU))2].

§

Not used in analysis because this value may contain large errors; ΔGU(H2O) is only 4.0 kJ/mol and the refolding rate constant in water had to be estimated, assuming a two-state reaction, using the equilibrium stability and the unfolding speed.

Not used in analysis because ΔGU(mutant,H2O)-ΔGU(WT,H2O) is only 2.5 kJ/mol and the φ-value estimation may be unreliable.