Table 1.
Assembly, reads mapping and quality evaluation statistics for Bryum argenteum transcriptomes at each step of refinement.
| Parameters | Bryum_all | Long_isoform | Bryum_filter | Bryum_final |
|---|---|---|---|---|
| No. of transcripts | 260,914 | 215,754 | 80,549 | 76,206 |
| Transcriptome size (Mb) | 246.0 | 168.5 | 98.5 | 93.1 |
| N50 (bp) | 1,671 | 1,260 | 2,012 | 2,016 |
| Average_length (bp) | 943 | 781 | 1,223 | 1,222 |
| Median_length (bp) | 493 | 431 | 794 | 792 |
| Minimum_length (bp) | 224 | 224 | 224 | 224 |
| Maximum_length (bp) | 18,771 | 18,771 | 18,771 | 18,771 |
| Total_mapped_reads (%) | 90.03 | 85.96 | 84.90 | 84.67 |
| Uniquely mapped reads (%) | 52.13 | 69.62 | 68.78 | 74.38 |
| TransRate-Assembly Score | 0.23 | 0.25 | 0.32 | 0.36 |