Table 6.
Sample | Total reads | Low quality value | Incorrect size | Adaptors | Contain N base | Clean reads | Specific reads (total) | Specific reads (unique) | Match genome |
---|---|---|---|---|---|---|---|---|---|
FS | 36,647,546 | 29,235 | 540,616 | 1,137 | 104,996 | 35,971,562 (98.16%) | 1,276,084(20.39%) | 9,636,103(46.21%) | 26,400,645(73.89%) |
SS | 27,244,395 | 12,972 | 531,812 | 708 | 76,565 | 26,622,338 (97.72%) | 7,912,816(12.64%) | 6,323,897 (30.33%) | 18,959,057(71.21%) |
FS and SS indicated PTGMS plants in sterile (SS) and fertile condition (FS) of three stages, respectively.