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. 2017 Aug 9;8:44. doi: 10.1186/s13229-017-0161-9

Table 2.

Haplotype analysis of polymorphisms in promoter region of AVPR1A

Marker Biallelic mode Model Additive Dominant Recessive
Haplotype Freq. N Z p N Z p N Z p
1-3 330-310 0.135 70 − 0.753 0.452 69 − 0.770 0.441 11 − 0.164 0.869
2-4 A-A 0.736 133 3.826 < 0.001 55 3.651 < 0.001 118 2.655 0.001
A-G 0.064 48 − 3.586 < 0.001 48 − 3.311 < 0.001
1-2 330-A 0.235 109 − 0.230 0.818 99 − 0.937 0.349 33 1.212 0.225
2-3 A-310 0.384 145 1.639 0.101 116 2.112 0.035 72 0.125 0.900
3-4 310-A 0.367 149 2.552 0.011 124 2.995 0.003 72 0.564 0.573
1-2-3 330-A-310 0.125 65 − 0.891 0.373 65 − 1.045 0.296 10 0.174 0.862
2-3-4 A-310-A 0.352 142 2.505 0.012 118 2.650 0.008 61 0.878 0.380
Multi-allelic mode Df χ2 p Df χ2 p Df χ2 p
1-3 6 6.538 0.366 6 5.425 0.491
2-4 3 24.302 < 0.001 3 20.364 < 0.001 2 9.650 0.008
1-2 6 3.859 0.696 6 3.779 0.707 3 6.899 0.075
2-3 5 5.594 0.348 5 7.474 0.188 2 2.148 0.341
3-4 5 18.501 0.002 5 18.934 0.002 2 4.027 0.134
1-2-3 6 7.455 0.281 6 6.676 0.352
2-3-4 5 19.869 0.001 5 17.603 0.003 2 2.612 0.271

1 RS3 (complex), 2 rs7294536, 3 RS1 (GATA), 4 rs10877969, N number of informative nuclear families, Df degree of freedom, χ 2 χ 2 statistics, p p value