Table 2.
Marker | Biallelic mode | Model | Additive | Dominant | Recessive | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Haplotype | Freq. | N | Z | p | N | Z | p | N | Z | p | |
1-3 | 330-310 | 0.135 | 70 | − 0.753 | 0.452 | 69 | − 0.770 | 0.441 | 11 | − 0.164 | 0.869 |
2-4 | A-A | 0.736 | 133 | 3.826 | < 0.001 | 55 | 3.651 | < 0.001 | 118 | 2.655 | 0.001 |
A-G | 0.064 | 48 | − 3.586 | < 0.001 | 48 | − 3.311 | < 0.001 | – | – | – | |
1-2 | 330-A | 0.235 | 109 | − 0.230 | 0.818 | 99 | − 0.937 | 0.349 | 33 | 1.212 | 0.225 |
2-3 | A-310 | 0.384 | 145 | 1.639 | 0.101 | 116 | 2.112 | 0.035 | 72 | 0.125 | 0.900 |
3-4 | 310-A | 0.367 | 149 | 2.552 | 0.011 | 124 | 2.995 | 0.003 | 72 | 0.564 | 0.573 |
1-2-3 | 330-A-310 | 0.125 | 65 | − 0.891 | 0.373 | 65 | − 1.045 | 0.296 | 10 | 0.174 | 0.862 |
2-3-4 | A-310-A | 0.352 | 142 | 2.505 | 0.012 | 118 | 2.650 | 0.008 | 61 | 0.878 | 0.380 |
Multi-allelic mode | Df | χ2 | p | Df | χ2 | p | Df | χ2 | p | ||
1-3 | 6 | 6.538 | 0.366 | 6 | 5.425 | 0.491 | – | – | – | ||
2-4 | 3 | 24.302 | < 0.001 | 3 | 20.364 | < 0.001 | 2 | 9.650 | 0.008 | ||
1-2 | 6 | 3.859 | 0.696 | 6 | 3.779 | 0.707 | 3 | 6.899 | 0.075 | ||
2-3 | 5 | 5.594 | 0.348 | 5 | 7.474 | 0.188 | 2 | 2.148 | 0.341 | ||
3-4 | 5 | 18.501 | 0.002 | 5 | 18.934 | 0.002 | 2 | 4.027 | 0.134 | ||
1-2-3 | 6 | 7.455 | 0.281 | 6 | 6.676 | 0.352 | – | – | – | ||
2-3-4 | 5 | 19.869 | 0.001 | 5 | 17.603 | 0.003 | 2 | 2.612 | 0.271 |
1 RS3 (complex), 2 rs7294536, 3 RS1 (GATA), 4 rs10877969, N number of informative nuclear families, Df degree of freedom, χ 2 χ 2 statistics, p p value