Clean reads (M)/uniquely mapped reads (M) (%) |
54.0/17.4 (32.2%) |
411.7/304.0 (73.8%) |
Uniquely mapped reads in genic regions (M) (%) |
14.5 (83.3%) |
277.4 (67.4%) |
Uniquely mapped reads in inter-genic regions (M) (%) |
2.9 (16.7%) |
143.4 (32.6%) |
Coverage for sorghum genome (Mb) (%) |
4.1 (0.6%) |
115.8 (17.6%) |
Coverage for genic regions (Mb) (%) |
3.0 (73.2%) |
70.5 (58.4%) |
Coverage for inter-genic regions (M) (%) |
1.1(26.8%) |
45.3 (39.1%) |
Total SNPs/density of coverage (per Mb) |
20,691/5046.6 |
884,287/7636.2 |
SNPs in genic regions (%) /intergenic regions (%) |
17,550 (84.8%)/3141 (15.2%) |
799,950 (90.5%)/84,337 (9.5%) |
Cost per sample/cost per thousand SNPs |
$388/$0.4 |
$70/$3.4 |