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. 2016 Oct 12;12(2):119–129. doi: 10.2217/fmb-2016-0111

Table 1. . Variable-number tandem repeats in Mycoplasma pneumoniae.

Repeat name Location on genome Repeat unit (consensus) Repeat unit size (bp) Copy number variation Affected gene ID and its function HGDI§
Mpn003
2849–2878
ATTAAATGGAAGACA
15
1–2
MPN003, gyrB
0.5098
Mpn1
111920–111991
CCGAGCTAAGCG
12
2–6
MPN089, hsdS
0.7890
Mpn103
134124–134131
TTTA
4
2–3
MPN103, unknown
0.5098
Mpn108a
141296–141317
AG
2
6–11
MPN108, 3′-UTR
0.8207
Mpn108b
141349–141362
AC/AG
2
7–20
MPN108, 3′-UTR
0.6963
Mpn111
146255–146274
AC/AG
2
10–17
MPN111, YtxK
0.5598
P1-AGT#
182793–182813
AGT
3
5–16
MPN141, P1 adhesin
0.8268
Mpn444
538724–53835
TAC
3
3–6
MPN444, lipoprotein
0.5988
Mpn13
596741–596804
TATTAATAACTATTCT
16
3–4
MPN490, 3′-UTR
0.5098
Mpn14
608651–608755
TGGACAAAATGGAAGTAAAAA
21
5–6
MPN501, unknown
0.4024
Mpn15
645561–645707
TTGTCCATTCTTTCTTCCATC
21
6–7
MPN524, unknown
0.5098
Mpn16
736123–736216
ATTTTTTAAAAGTTTTTATTTATCCGTTTTGACAACTGCTTTTTGTT
47
1–2
MPN613, unknown
0
Mpn651 775850–775852 AAT 3 1–2 MPN651, 5′-UTR 0.5098

Position on the M. pneumoniae M129 genome sequence (GenBank accession code U00089).

Based on comparison of 20 complete genome sequences except for Mpn16, which is based on the previous report [15].

§Based on typing of 41 isolates and excluding minor variants in heterogeneous loci (Supplementary Table 10).

Reported by Degrange et al. [15].

#Reported by Xiao et al. [8] and Zhao et al. [30].

gyrB: DNA gyrase subunit B; hsdS: Type 1 restriction enzyme S subunit; UTR: Untranslated region;YtxK: Adenine-specific methyltransferase.