Table 1.
Genus | Virus abbreviation | Amino acid identities (%) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
RdRp | Core RdRp | Putative MP | NP | Core NP | |||||||
WCLaV-1 | WCLaV-2 | WCLaV-1 | WCLaV-2 | WCLaV-1 | WCLaV-2 | WCLaV-1 | WCLaV-2 | WCLaV-1 | WCLaV-2 | ||
Emaravirus | EMARaV | 17.6 | 17.4 | 19.0 | 17.4 | 11.1 | 9.7 | 14.3 | 14.7 | – | – |
RRV | 17.6 | 16.6 | 18.7 | 17.6 | 16.7 | 13.8 | 9.2 | 12.0 | – | – | |
RLBV | 17.5 | 16.6 | 17.7 | 18.8 | 2.2 | 16.9 | 10.9 | 16.0 | – | – | |
HPWMoW | 17.1 | 17.3 | 17.4 | 17.0 | 17.6 | 17.2 | 15.3 | 13.3 | – | – | |
Tenuivirus | RSV | 17.8 | 18.6 | 25.8 | 27.2 | 14.6 | 17.1 | 15.5 | 14.1 | 19.6 | 17.3 |
RGSV | 17.8 | 18.0 | 26.8 | 26.5 | 17.1 | 16.4 | 16.8 | 15.4 | 21.2 | 13.0 | |
Phlebovirus | RVFV | 20.2 | 20.9 | 25.5 | 24.4 | – | – | 14.0 | 14.1 | 19.7 | 19.0 |
SFTSV | 21.2 | 22.1 | 25.6 | 24.5 | – | – | 16.1 | 15.5 | 19.2 | 16.7 | |
UUKV | 20.9 | 20.8 | 26.8 | 25.9 | – | – | 17.0 | 16.0 | 20.5 | 20.2 | |
SFNV | 21.8* | 22.1 | 27.5 | 26.5 | – | – | 16.6 | 17.4 | 20.3 | 21.5 | |
PuTV | 21.5 | 22.1 | 26.8 | 27.1 | – | – | 16.3 | 18.7 | 21.0 | 23.2 | |
SALV | 21.2 | 22.7 | 27.6 | 26.9 | – | – | 17.2 | 17.3 | 19.8 | 20.8 | |
CDUV | 20.9 | 22.1 | 26.3 | 25.5 | – | – | 13.5 | 14.9 | 16.9 | 20.4 | |
BUJV | 20.7 | 21.9 | 27.3 | 26.9 | – | – | 15.7 | 15.4 | 19.6 | 19.7 | |
Orthotospovirus | TSWV | 16.7 | 16.4 | 15.8 | 16.2 | 13.4 | 11.2 | 13.7 | 13.7 | 16.8 | 15.2 |
WBNV | 15.2 | 17.4 | 17.2 | 16.1 | 15.6 | 12.8 | 5.8 | 10.2 | 7.6 | 3.1 | |
WSMoV | 15.7 | 17.4 | 17.3 | 16.1 | 14.0 | 15.8 | 5.4 | 12.7 | 4.3 | 13.4 | |
INSV | 16.3 | 16.3 | 16.9 | 16.1 | 14.7 | 15.1 | 13.4 | 6.0 | 16.0 | 4.3 | |
GBNV | 15.9 | 17.2 | 17.1 | 16.2 | 18.3 | 18.5 | 3.2 | 9.7 | 4.0 | 4.1 | |
IYSV | 16.9 | 15.6 | 17.3 | 16.6 | 16.9 | 11.2 | 16.1 | 4.6 | 16.1 | 7.8 | |
PolRSV | 17.0 | 15.2 | 16.7 | 16.2 | 17.0 | 11.4 | 10.9 | 12.2 | 13.5 | 12.0 | |
Orthohantavirus | HTAV | 15.6 | 17.3 | 15.1 | 17.0 | – | – | 14.7 | 4.4 | 8.1 | 2.7 |
Orthobunyavirus | BUNV | 17.1 | 17.5 | 17.7 | 17.1 | – | – | 5.8 | 5.2 | 0.7 | 0.8 |
Orthonairovirus | CCHFV | 12.1 | 11.8 | 16.9 | 17.5 | – | – | 11.2 | 7.5 | 0.8 | 1.2 |
Ophiovirus | CPsV | 17.5 | 17.2 | – | – | 13.6 | 12.2 | 16.9 | 13.0 | 10.2 | 2.8 |
LRNV | 13.6 | 14.1 | – | – | 10.7 | 16.5 | 15.0 | 12.5 | 6.7 | 15.7 | |
BIMaV | 15.6 | 15.6 | – | – | 13.0 | 13.5 | 10.4 | 13.2 | 17.4 | 18.7 | |
MLBVV | 15.2 | 16.2 | – | – | 14.3 | 13.2 | 16.8 | 10.5 | 17.4 | 3.7 | |
WCLaV-1 | – | 59.0 | – | 75.0 | – | 46.1 | – | 47.9 | – | 56.8 | |
WCLaV-2 | 59.0** | – | 75.0 | – | 46.1 | – | 47.9 | – | 56.8 | – |
Numbers in red represent highest identities of WCLaV-1 and WCLaV-2 with selected (-ss) RNA viruses.
Numbers reported in green represent WCLaV-1 and -2 mutual identities.
***The extended names of viruses corresponding to virus abbreviations are shown in Table S5.