Figure 2.

Examples of transcripts differing from the current P. vivax gene annotations. Data from each patient are displayed in successive rows (labeled 1–3). For each data set, the grey track shows the read coverage, the bridges display evidence of intron splicing and the blue and red bars the actual reads generated. (A) Read coverage across PvCRT. Note that intron 9 is retained in some of the transcripts from infections 2 and 3 and in all transcripts from infection 1 (red box). (B) Read coverage across PvMDR1. Note that in two infections, some PvMDR1 transcripts contains an unannotated intron in 3′-UTR resulting in a longer transcript (red box).