Strains and mutations |
|
|
Rosetta 2 (DE3) pLysS |
E. coli used for protein expression |
Merck Millipore, Germany |
DH5α |
E. coli used for cloning |
TaKaRa, Japan |
T. thermophilus HB8 |
Wild type |
BioResource Center, RIKEN, Japan. |
ΔTTHA0328 |
TTHA0328 deletion strain of T. thermophilus
|
This work |
Plasmids |
|
|
pET11a-TTHA0328 |
Expression plasmid for nicotinamidase |
BioResource Center, RIKEN, Japan |
pUC19-HTK |
Source of thermostable kanamycin resistance cassette |
BioResource Center, RIKEN, Japan |
pUC19-ΔTTHA0328 |
Plasmid for TTHA0328 deletion, containing HTK gene |
This work |
Oligonucleotides |
|
|
U-F |
5′-ATTCGAGCTCGGTACCCGGGGGAGACCCGGTCCCCGTA-3′ |
PCR for upstream region of TTHA0328 |
U-R |
5′-GCCGTCAACGCACCTGGACCATGCCCTC-3′ |
PCR for upstream region of TTHA0328 |
D-F |
5′-GGTCCAGGTGCGTTGACGGCGGATATGG-3′ |
PCR for downstream region of TTHA0328 |
D-R |
5′-AAACAAACCGCGTAACCAACATGATTAAGAATTATTAGAGG-3′ |
PCR for downstream region of TTHA0328 |
HTK-F |
5′-GTTGGTTACGCGGTTTGTTTGAGCACCCCG-3′ |
PCR for HTK |
HTK-R |
5′-CCTGCAGGTCGACTCTAGAGCCTCGCCGAAGGCGGGAA-3′ |
PCR for HTK |
Seq_F |
5′-GCGTTGTTGAAGAAGAGCTGGG-3′ |
PCR for sequencing |
Seq_R |
5′-CTTTAGGGGGAGGACAGGCTTC-3′ |
PCR for sequencing |