Table 1.
Summary of the H. annosum small secreted protein (HaSSP) encoding genes retrieved from the H. annosum TC 32-1 genome annotation.
| HaSSP candidate number | Protein ID (Hetan1)1 | Protein ID (Hetan2.0)1 | Gene name (Hetan2)1 | Length (bp) | Length (AA) | Protein ID | Cys-Cys bonds number | EST support |
|---|---|---|---|---|---|---|---|---|
| 1 | 58748 | 58748 | Hetan1.estExt_Genewise1Plus.C_10476 | 585 | 195 | 58748 | 5 | YES |
| 2 | 99056 | 99056 | Hetan1.Genemark.129_g | 900 | 300 | 99056 | 5 | NO |
| 3 | 101504 | 101504 | Hetan1.Genemark.2577_g | 468 | 156 | 101504 | 1 | NO |
| 4 | 102625 | 102625 | Hetan1.Genemark.3698_g | 351 | 117 | 102625 | 1 | NO |
| 5 | 102999 | 102999 | Hetan1.Genemark.4072_g | 615 | 205 | 102999 | 2 | NO |
| 6 | 103544 | 103544 | Hetan1.Genemark.4617_g | 582 | 194 | 103544 | 2 | NO |
| 7 | 106199 | 106199 | Hetan1.Genemark.7272_g | 645 | 215 | 106199 | 2 | NO |
| 8 | 106204 | 106204 | Hetan1.Genemark.7277_g | 339 | 113 | 106204 | 1 | NO |
| 9 | 107400 | 107400 | Hetan1.Genemark.8473_g | 387 | 129 | 107400 | 1 | NO |
| 10 | 107522 | 107522 | Hetan1.Genemark.8595_g | 483 | 161 | 107522 | 2 | NO |
| 11 | 108275 | 108275 | Hetan1.Genemark.9348_g | 1233 | 411 | 108275 | 4 | NO |
| 12 | 108527 | 108527 | Hetan1.Genemark.9600_g | 432 | 144 | 108527 | 3 | NO |
| 13 | 109064 | 109064 | Hetan1.Genemark.10137_g | 558 | 186 | 109064 | 5 | YES |
| 14 | 118007 | 118007 | Hetan1.fgenesh2_pg.C_scaffold_7000137 | 744 | 248 | 118007 | 1 | YES |
| 15 | 119220 | 119220 | Hetan1.fgenesh2_pg.C_scaffold_10000169 | 822 | 274 | 119220 | 2 | NO |
| 16 | 120415 | 120415 | Hetan1.fgenesh2_pg.C_scaffold_13000272 | 741 | 247 | 120415 | 2 | NO |
| 17 | 120417 | 120417 | Hetan1.fgenesh2_pg.C_scaffold_13000274 | 453 | 151 | 120417 | 1 | NO |
| 18 | 120417 | 120798 | Hetan1.fgenesh2_pg.C_scaffold_15000086 | 606 | 202 | 120798 | 1 | NO |
| 19 | 157644 | 157644 | Hetan1.estExt_fgenesh2_pm.C_130199 | 453 | 151 | 157644 | 2 | YES |
| 20 | 162925 | 162925 | Hetan1.EuGene10000530 | 222 | 74 | 162925 | 2 | NO |
| 21 | 163365 | 163365 | Hetan1.EuGene11000336 | 306 | 102 | 163365 | 3 | NO |
| 22 | 173217 | 173217 | Hetan1.EuGene7000278 | 327 | 109 | 173217 | 5 | YES |
| 23 | 174683 | 174683 | Hetan1.EuGene9000335 | 273 | 91 | 174683 | 4 | NO |
| 24 | 116393 | 312085 | e_gw1.03.1544.1 | 618 | 206 | 312085 | 2 | NO |
| 25 | 34813 | 314110 | e_gw1.03.1702.1 | 471 | 157 | 314110 | 3 | YES |
| 26 | 104923 | 317287 | e_gw1.05.2448.1 | 1092 | 364 | 317287 | 2 | NO |
| 27 | 25033 | 318819 | e_gw1.05.2082.1 | 798 | 266 | 318819 | 1 | NO |
| 28 | 55873 | 326012 | e_gw1.09.1661.1 | 720 | 240 | 326012 | 4 | NO |
| 29 | NA | 328808 | e_gw1.11.1302.1 | 174 | 58 | 328808 | 3 | NO |
| 30 | 164295 | 391204 | estExt_Genewise1.C_131090 | 534 | 178 | 391204 | 1 | YES |
| 31 | NA | 414262 | fgenesh1_pm.02_#_149 | 417 | 139 | 414262 | 3 | YES |
| 32 | 115627 | 418080 | fgenesh1_pm.05_#_676 | 372 | 124 | 418080 | 2 | NO |
| 33 | 169544 | 418760 | fgenesh1_pm.06_#_505 | 336 | 112 | 418760 | 4 | YES |
| 34 | 162746 | 422598 | fgenesh1_pm.12_#_283 | 492 | 164 | 422598 | 3 | NO |
| 35 | 108551 | 423383 | fgenesh1_pm.14_#_116 | 378 | 126 | 423383 | 2 | NO |
| 36 | 116836 | 425913 | fgenesh1_pg.03_#_659 | 813 | 271 | 425913 | 4 | NO |
| 37 | NA | 425924 | fgenesh1_pg.03_#_670 | 891 | 297 | 425924 | 2 | NO |
| 38 | 154711 | 427282 | fgenesh1_pg.05_#_541 | 795 | 265 | 427282 | NA | YES |
| 39 | 115568 | 427322 | fgenesh1_pg.05_#_581 | 726 | 242 | 427322 | 2 | NO |
| 40 | 152005 | 429704 | fgenesh1_pg.10_#_299 | 525 | 175 | 429704 | 3 | NO |
| 41 | 120216 | 430810 | fgenesh1_pg.13_#_214 | 507 | 169 | 430810 | 1 | NO |
| 42 | 145189 | 431393 | estExt_fgenesh1_pm.C_010330 | 798 | 266 | 431393 | 1 | YES |
| 43 | 108765 | 439412 | estExt_fgenesh1_kg.C_040024 | 306 | 102 | 439412 | 2 | YES |
| 44 | 148537 | 439593 | estExt_fgenesh1_kg.C_040240 | 696 | 232 | 439593 | 1 | YES |
| 45 | 147795 | 441917 | estExt_fgenesh1_kg.C_100319 | 1428 | 476 | 441917 | 4 | YES |
| 46 | 148061 | 442002 | estExt_fgenesh1_kg.C_110095 | 603 | 201 | 442002 | 5 | YES |
| 47 | NA | 447006 | estExt_fgenesh1_pg.C_130285 | 660 | 220 | 447006 | 1 | YES |
| 48 | 157214 | 450757 | Genemark.3585_g | 582 | 194 | 450757 | 1 | NO |
| 49 | 104830 | 451269 | Genemark.4097_g | 642 | 214 | 451269 | 4 | NO |
| 50 | 103839 | 452658 | Genemark.5486_g | 627 | 209 | 452658 | 2 | NO |
| 51 | 103483 | 452993 | Genemark.5821_g | 537 | 179 | 452993 | 3 | YES |
| 52 | NA | 456226 | Genemark.9054_g | 618 | 206 | 456226 | 2 | YES |
| 53 | 146303 | 459335 | estExt_Genemark.C_060269 | 216 | 72 | 459335 | 4 | YES |
| 54 | 108486 | 461461 | estExt_Genemark.C_140166 | 1011 | 337 | 461461 | 4 | NO |
| 55 | 168056 | 470877 | estExt_Genewise1Plus.C_021603 | 252 | 84 | 470877 | 2 | YES |
| 56 | 104047 | 477946 | estExt_Genewise1Plus.C_080375 | 465 | 155 | 477946 | 2 | YES |
| 57 | 107965 | 482211 | estExt_Genewise1Plus.C_130878 | 1326 | 442 | 482211 | 8 | YES |
| 58 | 165012 | 482547 | estExt_Genewise1Plus.C_140371 | 627 | 209 | 482547 | 4 | YES |