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. 2017 Aug 11;7:354. doi: 10.3389/fcimb.2017.00354

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Copyright © 2017 Petrovska, Tang, Jansen van Rensburg, Cawthraw, Nunez, Sheppard, Ellis, Whatmore, Crawshaw and Irvine.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Relationships between C. hepaticus and other Campylobacter species based on gene-by-gene analyses. Maximum likelihood trees based on concatenated nucleotide sequences of (A) 52 rMLST genes from 86 isolates comprising 25 Campylobacter species; and (B) 646 core genes identified by cgMLST in ≥90% of 59 isolates comprising 11 closely related thermophilic Campylobacter species. Bootstrap values <80 (A) or <100 (B) are shown for major nodes. Gray shading indicates taxa with multiple representative isolates. Subspecies are marked with colored circles, as indicated in the legend. The insets provide magnified views of the relationships among C. hepaticus isolates. ^*, farm 1; ^**, farm 2; ▴, farm 4; ▾, farm 5.