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Regions that define MHC-wide expression patterns. (A) Pairwise haplotype comparisons of the agreement of 200kb window cluster patterns with MHC-wide cluster patterns. (B) Regions within the MHC region enriched with eQTL that dictate the transcription variability of the haplotype-specific differentially expressed genes (red). Gray bars indicate gene density in each 200-kb window. Chr, chromosome; eQTL, expression quantitative trait loci; MHC, major histocompatibility complex.
