TABLE 1.
The significance analysis of the two tumor types with Bonferroni correction of each arm (TCGA dataset)
| Chrom | P arm
|
Q arm
|
||||
|---|---|---|---|---|---|---|
| Number of genesa | LUAD vs NMb | LUSC vs NM | Number of genesa | LUAD vs NM | LUSC vs NM | |
| 1 | 1263 | 8% | 74% | 1162 | 100% | 100% |
| 2 | 602 | 100% | 100% | 965 | 78% | 80% |
| 3 | 580 | 99% | 100% | 700 | 6% | 100% |
| 4 | 287 | 2% | 96% | 617 | 67% | 76% |
| 5 | 210 | 100% | 100% | 915 | 53% | 100% |
| 6 | 737 | 100% | 9% | 543 | 99% | 2% |
| 7 | 393 | 100% | 100% | 778 | 98% | 98% |
| 8 | 350 | 83% | 97% | 545 | 100% | 100% |
| 9 | 261 | 100% | 52% | 730 | 100% | 14% |
| 10 | 224 | 6% | 52% | 717 | 34% | 91% |
| 11 | 522 | 4% | 52% | 991 | 43% | 11% |
| 12 | 335 | 16% | 100% | 897 | 30% | 62% |
| 13 | 0 | /c | / | 479 | 87% | 92% |
| 14 | 0 | / | / | 819 | 26% | Noned |
| 15 | 0 | / | / | 861 | 97% | 20% |
| 16 | 552 | 70% | 26% | 461 | 30% | 29% |
| 17 | 427 | 91% | 97% | 991 | 100% | 67% |
| 18 | 99 | None | 97% | 268 | 63% | 35% |
| 19 | 673 | 99% | 23% | 994 | 57% | 36% |
| 20 | 237 | 13% | 100% | 443 | 100% | 100% |
| 21 | 6 | 100% | 100% | 301 | None | 88% |
| 22 | None | None | None | 559 | 71% | 95% |
a
Number of genes: total number of genes with known gene symbols in each arm;
b
NM: non-malignant;
c
/: Not available;
d
None: None of genes is significantly different;
