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. 2017 Aug 14;7:8007. doi: 10.1038/s41598-017-08321-2

Table 2.

Statistical metrics for the best algorithm of each cluster of method and their combined regression model, both the “Full Regression” and the stepwise-optimized regression model (rf + svmPoly + pda) for both training and testing set.

C5.0 pda plr rf svmPoly Full Regression rf + svmPoly + pda
Train Test Train Test Train Test Train Test Train Test Train Test Train Test
AUROC 0.88 0.83 0.85 0.84 0.83 0.85 0.93 0.83 0.89 0.83 0.91 0.91 0.91 0.91
Accuracy 0.88 0.91 0.85 0.88 0.83 0.85 0.93 0.90 0.89 0.90 0.94 0.95 0.94 0.95
Sensitivity 0.78 0.68 0.86 0.76 0.82 0.84 0.87 0.71 0.80 0.68 0.98 0.98 0.98 0.98
Specificity 0.98 0.98 0.84 0.91 0.85 0.85 0.98 0.96 0.98 0.97 0.84 0.85 0.84 0.85
PPV 0.98 0.90 0.84 0.73 0.84 0.64 0.98 0.84 0.97 0.87 0.95 0.95 0.95 0.95
NPV 0.81 0.91 0.85 0.93 0.82 0.95 0.89 0.91 0.83 0.91 0.91 0.94 0.91 0.94
FPR 0.22 0.32 0.14 0.24 0.18 0.16 0.13 0.29 0.20 0.32 0.02 0.02 0.02 0.02
FNR 0.02 0.02 0.16 0.09 0.15 0.15 0.02 0.04 0.02 0.03 0.16 0.15 0.16 0.15
F1 0.86 0.78 0.85 0.74 0.83 0.73 0.92 0.77 0.88 0.76 0.96 0.97 0.96 0.97

PCA: dataset upon Principal Component Analysis; PCAUp: dataset upon Principal Component Analysis and up-scaling of the minor class; PCADown: dataset upon Principal Component Analysis and down-sampling of the major class; Scaled: dataset upon z-score calculation; ScaledUp: dataset upon z-score calculation and up-sampling of the minor class; ScaledDown: dataset upon z-score calculation and down-sampling of the major class.