Table 2.
ND modeling to assess the relative contribution of connectivity and gene expression profile in explaining tau progression and distribution
Measure | Boluda DSAD (6 Mo) | Boluda CBD (6 Mo) | Iba Hipp. Inj. (6 Mo) | Iba Str. Inj. (6 Mo) | Clavaguera (15 Mo) | |
---|---|---|---|---|---|---|
Mouse Model | / | P301S | P301S | P301S | P301S | Alz17 |
Infusate | / | DSAD Homogenate | CBD Homogenate | Synthetic Tau Fibrils | Synthetic Tau Fibrils | P301S Purified Tau |
Seed Region | / | CA1 & V1 | CA1 | CA1 & CA3 | Caudoput. | Hippocampus |
ND USING STUDY SELECTED REGIONS (BIVARIATE CORRELATIONS) | ||||||
Connectivity, Deposition | ΔR | 0.30 | 0.22 | 0.45 | 0.23 | 0.25 |
Connectivity, Slope | ΔR | 0.27 | 0.23 | 0.40 | 0.11 | 0.47 |
Spatial, Deposition | ΔR | 0.01 | 0.00 | 0.01 | 0.00 | 0.03 |
Spatial, Slope | ΔR | 0.02 | 0.00 | 0.01 | 0.00 | 0.01 |
General Gene, Dep. | ΔR | 0.08 | 0.00 | 0.10 | 0.10 | 0.01 |
General Gene, Slope | ΔR | 0.17 | 0.01 | 0.28 | 0.08 | 0.22 |
Specific Gene, Dep. | ΔR | 0.01 | 0.02 | 0.03 | 0.02 | 0.00 |
Specific Gene, Slope | ΔR | 0.02 | 0.02 | 0.22 | 0.00 | 0.05 |
Noradren. Gene, Dep. | ΔR | 0.00 | 0.00 | 0.00 | 0.07 | 0.00 |
Noradren. Gene, Slope | ΔR | 0.00 | 0.00 | 0.01 | 0.03 | 0.00 |
ND-CONNECTIVITY VS REGIONAL GENE EXPRESSION (MULTIVARIATE LINEAR MODEL) | ||||||
Connectivity | T-Stat | 12.74*** | 8.97*** | 10.51*** | 2.90** | 2.50* |
Seed or Baseline | T-Stat | −0.31 | 1.40 | 0.28 | 0.50 | 1.69 |
Summed Specific Gene Ex. | T-Stat | −1.85 | −2.05* | −2.42* | 2.53* | 0.32 |
Summed Noradren. Gene Ex. | T-Stat | 2.64** | 1.67 | 1.92 | 0.44 | 0.19 |
The entries below the “Bivariate Correlations” row correspond to the ΔR obtained from running the ND model with each row’s network from reported seedpoint. The four entries after the “Multivariate Linear Model” row represent the t-values and p-value thresholds obtained from ND model predictions or summed regional expression predictions after they were input as independent predictors into a Multivariate Linear Fit Model. *** p < 0.001, ** p < 0.01, * p < 0.05