Table 1.
HDAC-GLO Deacetylase Analysis. (A) Descriptive Calculation and Explanation of Compound Dilutions to Achieve a 100 nm–25 µm Treatment Range. Sample Plate Layout (96-Well Format) for Each Compound in Triplicates [Boxes 1, 2, 3 for Tubastatin A (Tuba A) and 4, 5, 6 for Entinostat]. (B) Descriptive Calculations for HDAC-GLO Media Mix Preparation
| (A) Compound stock: Make enough for 10 wells for each compound (Note: for each compound prepare the stock in tube 1 of the 8-well strip). Stock concentration for each compound should be adjusted to 25 µM | |||||
|---|---|---|---|---|---|
| Add media to tubes 2–8 (as calculated in 2nd and 5th columns) and to dilute the stock as indicated | |||||
| Tuba A | Entinostat | ||||
| 1 | 25 µM stock | 1 | 25 µM stock | ||
| 2 | 90 µL media | 60 µL from tube 1 | 2 | 90 µL media | 60 µL from tube 1 |
| 3 | 75 µL media | 75 µL from tube 2 | 3 | 75 µL media | 75 µL from tube 2 |
| 4 | 75 µL media | 75 µL from tube 3 | 4 | 75 µL media | 75 µL from tube 3 |
| 5 | 135 µL media | 15 µL from tube 2 | 5 | 135 µL media | 15 µL from tube 2 |
| 6 | 135 µL media | 15 µL from tube 3 | 6 | 135 µL media | 15 µL from tube 3 |
| 7 | 135 µL media | 15 µL from tube 5 | 7 | 135 µL media | 15 µL from tube 5 |
| 8 | DMSO | 2.5 µL DMSO in 147.5 µL media | 8 | Triton X | 1.5 µL of Triton X in 148.5µL media |
| (B) Final 96-Well Plate Layout (in Triplicates) | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Tuba A | Entinostat | Additional Compounds |
Additional Compounds |
|||||||||
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |
| A | 25,000 | 25,000 | 25,000 | 25,000 | ||||||||
| B | 10,000 | 10,000 | 10,000 | 10,000 | ||||||||
| C | 5000 | 5000 | 5000 | 5000 | ||||||||
| D | 2500 | 2500 | 2500 | 2500 | ||||||||
| E | 1000 | 1000 | 1000 | 1000 | ||||||||
| F | 500 | 500 | 500 | 500 | ||||||||
| G | 100 | 100 | 100 | 100 | ||||||||
| H | DMSO control (Neg) | Triton X control (Pos) | Untreated control | |||||||||
Preparation of HDAC-GLO media mix. 1-Premix HDAC-GLO substrate + reagent (included in the Promega kit) and aliquot into 1500 µL volume.
To add 5 µL of developer (included in Promega kit) in 1500 µL premix HDAC-GLO solution.