Table 3. Number of Interactions (Hits) for Specific Interacting Residues Identified in the Contact Matrices for the Wild-Type TM5–TM5 Simulation at the 10 Å Cutoff.
| replica number |
|||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| figure label | interacting residues | 1 | 5 | 10 | 15 | 20 | 25 | 30 | 35 | 40 | 45 | 50 | mean distance ± standard deviation (in Å) |
| 1 | M1935.54–M1935.54 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 3 | 5 | 6 | 6 | 7.59 ± 2.89 |
| 2 | V1965.57–Y1975.58 | 0 | 1 | 2 | 2 | 2 | 4 | 4 | 6 | 9 | 12 | 13 | 9.16 ± 2.5 |
| 3 | Y1975.58–Y1975.58 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 4 | 6 | 7 | 8 | 9.11 ± 2.85 |
| 4 | Y1975.58–R1995.60 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 5 | 6 | 6 | 9.83 ± 3.57 |
| 5 | R1995.60–R1995.60 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 4 | 5 | 5 | 8.06 ± 2.99 |