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. 2005 Mar 4;6:5. doi: 10.1186/1471-2172-6-5

Table 1.

Primer sequences used for Cyproquant assays Table shows position of amplification product within cDNA sequence (upper line) and within genomic sequence (lower line). GenBank accession numbers are indicated.

Gene name 5'-3' primer sequence Position cDNA-gene Accesion Number
IL-1β FW CCTGTCCTGCGTGTTGAAAGA 639–788 NM_000576
RW GGGAACTGGGCAGACTCAAA Int. Span. M15840
IL-4 FW AACAGCCTCACAGAGCAGAAGAC 177–278 BC070123
RW GCCCTGCAGAAGGTTTCCTT Int. Span. AF395008
IL-10 FW GCTGGAGGACTTTAAGGGTTACCT 210–318 AY029171
RW CTTGATGTCTGGGTCTTGGTTCT Int. Span. AF418271
IL-12p40 FW CATGGTGGATGCCGTTCA 636–767 AF180563
RW ACCTCCACCTGCCGAGAAT Int. Span. AY008847
IL-13 FW ACAGCCCTCAGGGAGCTCAT 135–231 NM_002188
RW TCAGGTTGATGCTCCATACCAT Int. Span. AF377331
IL-15 FW CCATCCAGTGCTACTTGTGTTTACTT 351–466 U14407
RW CCAGTTGGCTTCTGTTTTAGGAA Int. Span. X91233
IL-18 FW GACGCATGCCCTCAATCC 966–1071 NM_001562
RW CTAGAGCGCAATGGTGCAATC Exon E17138
IFN-γ FW GTTTTGGGTTCTCTTGGCTGTTA 151–263 NM_000619
RW AAAAGAGTTCCATTATCCGCTACATC Int. Span. AF375790
MIF FW GCCCGGACAGGGTCTACA 322–399 M25639
RW CTTAGGCGAAGGTGGAGTTGTT Int. Span. L19686
TGF-β1 FW CAAGGGCTACCATGCCAACT 1786–1869 NM_000660
RW AGGGCCAGGACCTTGCTG Int. Span. X05839
TNF-α FW CCCCAGGGACCTCTCTCTAATC 358–455 NM_000594
RW GGTTTGCTACAACATGGGCTACA Int. Span. AB088112
β2-MG FW AATTGAAAAAGTGGAGCATTCAGA 255–389 NM_004048
RW GGCTGTGACAAAGTCACATGGTT Exon M17987
UBC FW ATTTGGGTCGCGGTTCTTG 20–152 BC039193
RW TGCCTTGACATTCTCGATGGT Int. Span. D63791
YWHAZ FW ACTTTTGGTACATTGTGGCTTCAA 1090–1183 NM_003406
RW CCGCCAGGACAAACCAGTAT Exon NC_000008

Note: FW = Forward primer; RW = Reverse primer; Int. Span. = Intron spanning, i.e. Primers derived from different exons; Exon = both primers derived from the same exon. β2-MG = β2-microglobulin. UBC = Ubiquitin C. YWHAZ = tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation protein, zeta polypeptide.