Table 2.

QTLs for salt tolerance at the seedling stage identified using O. rufipogon introgression lines.

Traits	Chr.	QTL	Marker	LOD	PV (%)	P-value	Add.
STS	1	qST1-1	RM1	3	4	0.001	–0.3
	5	qST5-1	RM3328	2	8	0.003	0.64
	5	qST5-2	RM163	2	8	0.006	0.62
	9	qST9	RM296	3	4	0	–0.26
	10	qST10	RM258	2	4	0.001	0.42
	11	qST11-1	RM1124	3	5	0.001	–0.69
	11	qST11-2	RM7463	3	5	0.001	–0.45
	12	qST12	RM7102	2	4	0.001	0.43
Survival rate	1	qST1-1	RM1	3	5	0	–0.08
	1	qST1-2	RM3825	2	2	0.009	–0.04
	7	qST7	RM5436	2	4	0.007	–0.11
	9	qST9	RM296	3	5	0	–0.06
	10	qST10	RM258	2	4	0.002	0.09
	11	qST11-1	RM1124	2	5	0.001	–0.12
	11	qST11-2	RM7463	2	4	0.001	–0.07
	12	qST12	RM7102	2	4	0.007	0.12

Chr., chromosome; PV, phenotypic variation; Add., additive effect.